RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 BRD7Q9NPI1 651 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 GPR84Q9NQS5 396 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 ARL8BQ9NVJ2 186 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 VNN3Q9NY84 501 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 PIGLQ9Y2B2 252 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 KLHDC2Q9Y2U9 406 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 SNX5Q9Y5X3 404 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 LINC00312Q9Y6C7 94 aa4.92□□□□□ -1.62
LSM3P4-201ENST00000502948 DNAH3Q8TD57 4116 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 A0A087X0M5 115 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 A0A1B0GTI1 187 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 A0A1B0GX30 115 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 A0A1W2PRD5 423 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 A0A1W2PRF3 423 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 A0A1W2PRM7 423 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 hADV38S2A0JD32 116 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 B2RBV5 119 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 F2RL2O00254 374 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 DNAJC8O75937 253 aaPredicted RBP4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 NXPH2O95156 264 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 VSIG10L2P0DP72 767 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 BMXP51813 675 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 CAPZA1P52907 286 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 CDC42P60953 191 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 ESRRGP62508 458 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 EGFEM1PQ0D2K5 195 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 PPP1R8Q12972 351 aaKnown RBP4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 ZNF273Q14593 569 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 LY6EQ16553 131 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 CEP78Q5JTW2 689 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 SPIN3Q5JUX0 258 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 NXNL2Q5VZ03 156 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 PLCXD3Q63HM9 321 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 OR52W1Q6IF63 320 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 CCBE1Q6UXH8 406 aaPredicted RBP4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 MOB3CQ70IA8 216 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 RTN4RL2Q86UN3 420 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 ADGRG5Q8IZF4 528 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 OR8H2Q8N162 312 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 IQCF1Q8N6M8 205 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 DNAAF1Q8NEP3 725 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 OR14K1Q8NGZ2 314 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 OR51E1Q8TCB6 317 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 MRAPQ8TCY5 172 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 CREB3L1Q96BA8 519 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 PHF21AQ96BD5 680 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 R3HDM4Q96D70 268 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 RCC1LQ96I51 464 aaKnown RBP4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 SNX22Q96L94 193 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 ZNF714Q96N38 554 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 CITED2Q99967 270 aaPredicted RBP4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 GPR61Q9BZJ8 451 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 MMP28Q9H239 520 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 ELL3Q9HB65 397 aaPredicted RBP4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 ABCB10Q9NRK6 738 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 AURKAIP1Q9NWT8 199 aaPredicted RBP4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 SIGLEC9Q9Y336 463 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 UBE2J1Q9Y385 318 aaPredicted RBP4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 R4GMQ9 66 aa4.91□□□□□ -1.62
LSM3P4-201ENST00000502948 CCDC182A6NF36 153 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 OOSP1A8MZH6 123 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 LOC110117498-PIK3R3F6TDL0 507 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 M0QZK8 103 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 SYNGR1O43759 233 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 PEX14O75381 377 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 GATBO75879 557 aaKnown RBP4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 SULT1C4O75897 302 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 ARG1P05089 322 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 CSN2P05814 226 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 CD28P10747 220 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 CCL3L1P16619 93 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 LMO1P25800 156 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 CD34P28906 385 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 BRS3P32247 399 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 FUT6P51993 359 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 ARHGDIBP52566 201 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 CRISP1P54107 249 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 OR12D2P58182 307 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 GMFBP60983 142 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 SLC35A2P78381 396 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 BDH1Q02338 343 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 PRB3Q04118 309 aaPredicted RBP4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 TMED1Q13445 227 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 APOFQ13790 326 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 ZNF146Q15072 292 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 SSX2Q16385 188 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 SNAPC1Q16533 368 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 OXLD1Q5BKU9 147 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 VAX1Q5SQQ9 334 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 LDLRAD2Q5SZI1 272 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 FOXB2Q5VYV0 432 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 SLX4IPQ5VYV7 408 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 FAHD1Q6P587 224 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 ZNF322Q6U7Q0 402 aaPredicted RBP4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 GDPD3Q7L5L3 318 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 LHFPL4Q7Z7J7 247 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 TMEM179BQ7Z7N9 219 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 EGFL6Q8IUX8 553 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 DYNAPQ8N1N2 210 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 ZNF596Q8TC21 504 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms