RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 RBM38Q9H0Z9 239 aaKnown RBP11.42□□□□□ -0.58
CPNE1-227ENST00000498056 KCNK15Q9H427 330 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 ING4Q9UNL4 249 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 NPTNQ9Y639 398 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 CEPT1Q9Y6K0 416 aa11.42□□□□□ -0.58
CPNE1-227ENST00000498056 DSCAML1Q8TD84 2053 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 IGHV3OR15-7A0A075B7D8 119 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 SRRM5B3KS81 715 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 H3BMQ9 156 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 SLC17A2O00624 439 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 SLC22A1O15245 554 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 CALCBP10092 127 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 PTGFRP43088 359 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 GPR6P46095 362 aaPredicted RBP11.41□□□□□ -0.58
CPNE1-227ENST00000498056 CLDN12P56749 244 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 BTG1P62324 171 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 SPCS2Q15005 226 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 CLEC12BQ2HXU8 276 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 SMIM21Q3B7S5 101 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 SFRP4Q6FHJ7 346 aaPredicted RBP11.41□□□□□ -0.58
CPNE1-227ENST00000498056 SFXN4Q6P4A7 337 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 GLIPR1L1Q6UWM5 242 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 OR10K1Q8NGX5 313 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 C12orf43Q96C57 262 aaKnown RBP11.41□□□□□ -0.58
CPNE1-227ENST00000498056 BCL7BQ9BQE9 202 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 NRIP2Q9BQI9 281 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 DCSTAMPQ9H295 470 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 NARFLQ9H6Q4 476 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 RBFOX1Q9NWB1 397 aaKnown RBP11.41□□□□□ -0.58
CPNE1-227ENST00000498056 MTCH1Q9NZJ7 389 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 RSL24D1Q9UHA3 163 aaKnown RBP11.41□□□□□ -0.58
CPNE1-227ENST00000498056 DAPK2Q9UIK4 370 aa11.41□□□□□ -0.58
CPNE1-227ENST00000498056 A0A0G2JK05 382 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 SMIM31A0A1B0GVY4 71 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 DPPA5A6NC42 116 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 OOEPA6NGQ2 149 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 IFITM5A6NNB3 132 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 NOTOA8MTQ0 251 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 AIPO00170 330 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 KDM4BO94953 1096 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 HTR3BO95264 441 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 IL1AP01583 271 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 CSTBP04080 98 aaKnown RBP11.4□□□□□ -0.58
CPNE1-227ENST00000498056 SLC2A2P11168 524 aaPredicted RBP11.4□□□□□ -0.58
CPNE1-227ENST00000498056 PRKACAP17612 351 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 NPBWR2P48146 333 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 PSMD7P51665 324 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 ART1P52961 327 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 RIN1Q13671 783 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 SLC22A6Q4U2R8 563 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 C1QL2Q7Z5L3 287 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 LYPD6Q86Y78 171 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 CDH26Q8IXH8 852 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 Q8IYB0 196 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 SAXO1Q8IYX7 474 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 ZSCAN4Q8NAM6 433 aaPredicted RBP11.4□□□□□ -0.58
CPNE1-227ENST00000498056 DEFB108BQ8NET1 73 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 RAB1CQ92928 201 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 FAM46BQ96A09 425 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 SEH1LQ96EE3 360 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 BPESC1Q9GZL8 116 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 METTL9Q9H1A3 318 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 WDR13Q9H1Z4 485 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 STEAP1Q9UHE8 339 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 ITGB1BP2Q9UKP3 347 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 WIPI2Q9Y4P8 454 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 ABCA2Q9BZC7 2435 aa11.4□□□□□ -0.58
CPNE1-227ENST00000498056 PDZD2O15018 2839 aa11.4□□□□□ -0.59
CPNE1-227ENST00000498056 PPIAL4EA0A075B759 164 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 A0A0B4J203 849 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 A0A1W2PP11 408 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 NKX6-3A6NJ46 265 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 PPIAL4DF5H284 164 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 F8VVB4 439 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 F8VWA3 439 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 LGALS8O00214 317 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 FLNBO75369 2602 aaKnown RBP11.39□□□□□ -0.59
CPNE1-227ENST00000498056 IGHV2-70P01814 119 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 SFTPBP07988 381 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 PPIAL4FP0DN26 164 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 RPS19P39019 145 aaKnown RBP11.39□□□□□ -0.59
CPNE1-227ENST00000498056 ZMYND11Q15326 602 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 DGUOKQ16854 277 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 C1orf100Q5SVJ3 147 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 IDNKQ5T6J7 187 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 FIP1L1Q6UN15 594 aaKnown RBP11.39□□□□□ -0.59
CPNE1-227ENST00000498056 ACP7Q6ZNF0 438 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 CCDC168Q8NDH2 2452 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 PXT1Q8NFP0 134 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 TBC1D15Q8TC07 691 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 C10orf105Q8TEF2 133 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 GAL3ST1Q99999 423 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 LIN7BQ9HAP6 207 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 NLKQ9UBE8 527 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 IL36RNQ9UBH0 155 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 OR14J1Q9UGF5 321 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 PPIAL4AQ9Y536 164 aa11.39□□□□□ -0.59
CPNE1-227ENST00000498056 YLPM1P49750 1951 aaKnown RBP11.39□□□□□ -0.59
CPNE1-227ENST00000498056 IGHV4-30-2A0A087WSY4 118 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 TRAV38-1A0A0B4J264 116 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms