RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 TREM2Q9NZC2 230 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 CACNA1DQ01668 2161 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 A6NLC8 198 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 AKR7A2O43488 359 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 COX6B1P14854 86 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 MGMTP16455 207 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 S100A5P33763 92 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 GATA4P43694 442 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 ART1P52961 327 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 PIGYQ3MUY2 71 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 LINC00299Q6ZSB3 139 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 LRRC28Q86X40 367 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 CELF2-AS1Q8N7Q2 184 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 PTX4Q96A99 478 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 DIRAS2Q96HU8 199 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 NRIP2Q9BQI9 281 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 TRAF4Q9BUZ4 470 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 CLEC4MQ9H2X3 399 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 RAB22AQ9UL26 194 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 CACNG2Q9Y698 323 aa20.47■□□□□ 0.87
TNFRSF4-203ENST00000497869 RAI1Q7Z5J4 1906 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF4-203ENST00000497869 FAM25AB3EWG3 89 aa20.46■□□□□ 0.87
TNFRSF4-203ENST00000497869 FAM25CB3EWG5 89 aa20.46■□□□□ 0.87
TNFRSF4-203ENST00000497869 FAM25GB3EWG6 89 aa20.46■□□□□ 0.87
TNFRSF4-203ENST00000497869 WNT9BO14905 357 aa20.46■□□□□ 0.87
TNFRSF4-203ENST00000497869 PGA5P0DJD9 388 aa20.46■□□□□ 0.87
TNFRSF4-203ENST00000497869 RAB6AP20340 208 aa20.46■□□□□ 0.87
TNFRSF4-203ENST00000497869 ETV6P41212 452 aa20.46■□□□□ 0.87
TNFRSF4-203ENST00000497869 SNRPD2P62316 118 aaKnown RBP20.46■□□□□ 0.87
TNFRSF4-203ENST00000497869 KCNG3Q8TAE7 436 aa20.46■□□□□ 0.87
TNFRSF4-203ENST00000497869 CMTM3Q96MX0 182 aa20.46■□□□□ 0.87
TNFRSF4-203ENST00000497869 WDR13Q9H1Z4 485 aa20.46■□□□□ 0.87
TNFRSF4-203ENST00000497869 EXTL2Q9UBQ6 330 aa20.46■□□□□ 0.87
TNFRSF4-203ENST00000497869 LAMP3Q9UQV4 416 aa20.46■□□□□ 0.87
TNFRSF4-203ENST00000497869 GOSR1O95249 250 aa20.45■□□□□ 0.86
TNFRSF4-203ENST00000497869 HPXP02790 462 aa20.45■□□□□ 0.86
TNFRSF4-203ENST00000497869 EGR1P18146 543 aa20.45■□□□□ 0.86
TNFRSF4-203ENST00000497869 CDK2P24941 298 aa20.45■□□□□ 0.86
TNFRSF4-203ENST00000497869 SRP9P49458 86 aaKnown RBP20.45■□□□□ 0.86
TNFRSF4-203ENST00000497869 GMFBP60983 142 aa20.45■□□□□ 0.86
TNFRSF4-203ENST00000497869 RPS27AP62979 156 aaKnown RBP20.45■□□□□ 0.86
TNFRSF4-203ENST00000497869 MKXQ8IYA7 352 aa20.45■□□□□ 0.86
TNFRSF4-203ENST00000497869 S100A13Q99584 98 aa20.45■□□□□ 0.86
TNFRSF4-203ENST00000497869 TMEM59Q9BXS4 323 aa20.45■□□□□ 0.86
TNFRSF4-203ENST00000497869 SELENOIQ9C0D9 397 aa20.45■□□□□ 0.86
TNFRSF4-203ENST00000497869 MS4A5Q9H3V2 200 aa20.45■□□□□ 0.86
TNFRSF4-203ENST00000497869 GCN1Q92616 2671 aaKnown RBP20.45■□□□□ 0.86
TNFRSF4-203ENST00000497869 RAB27BO00194 218 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 TLE4Q04727 773 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 PDCD1Q15116 288 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 ZNF79Q15937 498 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 AGAP6Q5VW22 663 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 ELP2Q6IA86 826 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 CEP19Q96LK0 163 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 Q96M66 194 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 DIRC2Q96SL1 478 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 ATG5Q9H1Y0 275 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 FOXI3A8MTJ6 420 aaPredicted RBP20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 MZT1Q08AG7 82 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 FAM209AQ5JX71 171 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 HIST2H2BCQ6DN03 193 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 CDH24Q86UP0 819 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 POC1AQ8NBT0 407 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 CST11Q9H112 138 aa20.44■□□□□ 0.86
TNFRSF4-203ENST00000497869 CHD3Q12873 2000 aaKnown RBP20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 TRAPPC2LH3BP13 241 aa20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 SOCS1O15524 211 aa20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 NOS1APO75052 506 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 PTHLHP12272 177 aa20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 TNFSF4P23510 183 aa20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 PPOXP50336 477 aa20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 CAPZA1P52907 286 aa20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 SIGIRRQ6IA17 410 aa20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 OSR2Q8N2R0 312 aa20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 FAM89BQ8N5H3 189 aa20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 GCSAMQ8N6F7 178 aa20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 IGFBPL1Q8WX77 278 aa20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 VRK1Q99986 396 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 TM2D1Q9BX74 207 aa20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 HES4Q9HCC6 221 aa20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 HMG20AQ9NP66 347 aa20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 POLDIP2Q9Y2S7 368 aa20.43■□□□□ 0.86
TNFRSF4-203ENST00000497869 NBPF19A0A087WUL8 3843 aa20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 A0A0G2JMP0 313 aa20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 A0A0X1KG70 313 aa20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 CSTBP04080 98 aaKnown RBP20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 ACAA1P09110 424 aaPredicted RBP20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 GTF2F2P13984 249 aa20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 PTH2RP49190 550 aa20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 SNU13P55769 128 aaKnown RBP20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 TMEM50BP56557 158 aa20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 FGF12P61328 243 aa20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 FAM201AQ5SY85 155 aa20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 OR4M2Q8NGB6 313 aa20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 LRRC29Q8WV35 223 aa20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 RAB40AQ8WXH6 277 aa20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 ABHD1Q96SE0 405 aa20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 SDHCQ99643 169 aaPredicted RBP20.42■□□□□ 0.86
TNFRSF4-203ENST00000497869 CACNG6Q9BXT2 260 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms