RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 TMED9Q9BVK6 235 aa1.57□□□□□ -2.16
PSPC1-205ENST00000497722 OR51B5Q9H339 312 aa1.57□□□□□ -2.16
PSPC1-205ENST00000497722 NCOR1P1Q9H4R4 102 aa1.57□□□□□ -2.16
PSPC1-205ENST00000497722 SDHAF3Q9NRP4 125 aa1.57□□□□□ -2.16
PSPC1-205ENST00000497722 CA10Q9NS85 328 aa1.57□□□□□ -2.16
PSPC1-205ENST00000497722 INSIG2Q9Y5U4 225 aa1.57□□□□□ -2.16
PSPC1-205ENST00000497722 KPTNQ9Y664 436 aa1.57□□□□□ -2.16
PSPC1-205ENST00000497722 SEC16AO15027 2179 aa1.57□□□□□ -2.16
PSPC1-205ENST00000497722 K7ERS5 55 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 PLEKHA8P1O95397 391 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 ETHE1O95571 254 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 GNRHRP30968 328 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 GZMMP51124 257 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 SLC18A1P54219 525 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 CLDN8P56748 225 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 DAOAP59103 153 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 PSMC5P62195 406 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 IL5RAQ01344 420 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 ATP6AP1LQ52LC2 224 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 UBE2NLQ5JXB2 153 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 MRPL2Q5T653 305 aaKnown RBP1.56□□□□□ -2.16
PSPC1-205ENST00000497722 DUPD1Q68J44 220 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 FA2HQ7L5A8 372 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 LINC00523Q86TU6 105 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 ZCCHC24Q8N2G6 241 aaKnown RBP1.56□□□□□ -2.16
PSPC1-205ENST00000497722 OR8K3Q8NH51 312 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 FAM57AQ8TBR7 257 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 NT5CQ8TCD5 201 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 ITLN2Q8WWU7 325 aaPredicted RBP1.56□□□□□ -2.16
PSPC1-205ENST00000497722 FAM131CQ96AQ9 280 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 ZBED3Q96IU2 234 aaPredicted RBP1.56□□□□□ -2.16
PSPC1-205ENST00000497722 THTPAQ9BU02 230 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 BEX2Q9BXY8 128 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 DDX18Q9NVP1 670 aaKnown RBP1.56□□□□□ -2.16
PSPC1-205ENST00000497722 CRCT1Q9UGL9 99 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 VAX2Q9UIW0 290 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 SLC7A11Q9UPY5 501 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 KLF12Q9Y4X4 402 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 R4GN34 69 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 SBNO1A3KN83 1393 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 NID2Q14112 1375 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 PLEKHG2Q9H7P9 1386 aa1.56□□□□□ -2.16
PSPC1-205ENST00000497722 RPRD2Q5VT52 1461 aaKnown RBP1.56□□□□□ -2.16
PSPC1-205ENST00000497722 LEUTXA8MZ59 168 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 E7EQL1 145 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 AQP9O43315 295 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 PSIP1O75475 530 aaKnown RBP1.55□□□□□ -2.16
PSPC1-205ENST00000497722 IGHG2P01859 326 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 OR5AL1P0C617 328 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 INAFM2P0DMQ5 153 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 PRKACAP17612 351 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 COL8A2P25067 703 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 PAX6P26367 422 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 CSKP41240 450 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 HTR2BP41595 481 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 IFFO1Q0D2I5 559 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 TPBGQ13641 420 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 PDZD11Q5EBL8 140 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 FAM27D1Q5T7N8 215 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 CYP4Z2PQ8N1L4 340 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 OR51A7Q8NH64 312 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 C2orf15Q8WU43 125 aaKnown RBP1.55□□□□□ -2.16
PSPC1-205ENST00000497722 TFGQ92734 400 aaPredicted RBP1.55□□□□□ -2.16
PSPC1-205ENST00000497722 SMARCD1Q96GM5 515 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 COA1Q9GZY4 146 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 SLC38A1Q9H2H9 487 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 WDR55Q9H6Y2 383 aaPredicted RBP1.55□□□□□ -2.16
PSPC1-205ENST00000497722 KIR3DX1Q9H7L2 352 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 SND1-IT1Q9HBX3 110 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 PRSS16Q9NQE7 514 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 TAC3Q9UHF0 121 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 ICOSQ9Y6W8 199 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 PHLPP2Q6ZVD8 1323 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 SDK2Q58EX2 2172 aa1.55□□□□□ -2.16
PSPC1-205ENST00000497722 BRCA1P38398 1863 aaKnown RBP1.54□□□□□ -2.16
PSPC1-205ENST00000497722 C2orf16Q68DN1 1984 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 SHANK1Q9Y566 2161 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 ZNF99A8MXY4 864 aaPredicted RBP1.54□□□□□ -2.16
PSPC1-205ENST00000497722 IGLL5B9A064 214 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 C15orf65H3BRN8 121 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 ENSAO43768 121 aaKnown RBP1.54□□□□□ -2.16
PSPC1-205ENST00000497722 ENTPD6O75354 484 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 TRAPPC6AO75865 159 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 IGHMP01871 453 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 SCGB1C2P0DMR2 95 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 TUBG1P23258 451 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 DEKP35659 375 aaKnown RBP1.54□□□□□ -2.16
PSPC1-205ENST00000497722 CFHR2P36980 270 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 TGFBR2P37173 567 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 CCL23P55773 120 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 RAB25P57735 213 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 RPL31P62899 125 aaKnown RBP1.54□□□□□ -2.16
PSPC1-205ENST00000497722 MEF2CQ06413 473 aaPredicted RBP1.54□□□□□ -2.16
PSPC1-205ENST00000497722 FBXL19-AS1Q494R0 122 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 SYT6Q5T7P8 510 aaPredicted RBP1.54□□□□□ -2.16
PSPC1-205ENST00000497722 KCTD16Q68DU8 428 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 HCP5Q6MZN7 132 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 TMPPEQ6ZT21 453 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 LINC00336Q6ZUF6 198 aa1.54□□□□□ -2.16
PSPC1-205ENST00000497722 SCGB1C1Q8TD33 95 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms