RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 SRSF4Q08170 494 aaKnown RBP9.38□□□□□ -0.91
TRAPPC12-223ENST00000497597 C1orf140Q5VVS0 124 aa9.38□□□□□ -0.91
TRAPPC12-223ENST00000497597 SPRED2Q7Z698 418 aa9.38□□□□□ -0.91
TRAPPC12-223ENST00000497597 LGI3Q8N145 548 aa9.38□□□□□ -0.91
TRAPPC12-223ENST00000497597 GPBAR1Q8TDU6 330 aa9.38□□□□□ -0.91
TRAPPC12-223ENST00000497597 METTL9Q9H1A3 318 aa9.38□□□□□ -0.91
TRAPPC12-223ENST00000497597 PLEKHA2Q9HB19 425 aa9.38□□□□□ -0.91
TRAPPC12-223ENST00000497597 PATZ1Q9HBE1 687 aaKnown RBP9.38□□□□□ -0.91
TRAPPC12-223ENST00000497597 FUT9Q9Y231 359 aa9.38□□□□□ -0.91
TRAPPC12-223ENST00000497597 VPS13AQ96RL7 3174 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 CLDN34H7C241 214 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 HPNP05981 417 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 CEACAM5P06731 702 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 CDAP32320 146 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 EGR4Q05215 589 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 PRTGQ2VWP7 1150 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 TMEM176BQ3YBM2 270 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 PHF19Q5T6S3 580 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 CA13Q8N1Q1 262 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 LRRC18Q8N456 261 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 LFNGQ8NES3 379 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 OR5C1Q8NGR4 320 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 OR11L1Q8NGX0 322 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 LRRC3BQ96PB8 259 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 HIST1H2AAQ96QV6 131 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 LOC102724200A0A096LPH7 203 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 TLCD2A6NGC4 264 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 C17orf105B2RV13 164 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 SHISA8B8ZZ34 492 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 C9J4A7 227 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 PPP5D1E7EU14 171 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 AQP7O14520 342 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 UTS2O95399 124 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 AMBPP02760 352 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 ZNF728P0DKX0 622 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 IL11P20809 199 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 WNT5AP41221 380 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 TAS2R46P59540 309 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 HERV-K104P61576 105 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 CST6Q15828 149 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 FHL5Q5TD97 284 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 ZNF321PQ8N8H1 164 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 NEK7Q8TDX7 302 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 SLAMF6Q96DU3 332 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 SDSLQ96GA7 329 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 COX14Q96I36 57 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 PBOV1Q9GZY1 135 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 PAM16Q9Y3D7 125 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 STRAPQ9Y3F4 350 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 FAM221BA6H8Z2 402 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 OTOL1A6NHN0 477 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 MANSC4A6NHS7 340 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 A8MWP6 167 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 SEC11BP0C7V7 166 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 SLC35E2P0CK97 266 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 GZMBP10144 247 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 FCGR2AP12318 317 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 APOBEC1P41238 236 aaKnown RBP9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 P2RY1P47900 373 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 CLN3Q13286 438 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 P2RY6Q15077 328 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 FAM166AQ6J272 317 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 TOMM20LQ6UXN7 152 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 SHISA6Q6ZSJ9 500 aa9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 FOXD3Q9UJU5 478 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC12-223ENST00000497597 CELSR3Q9NYQ7 3312 aa9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 CDC14BO60729 498 aa9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 BPNT1O95861 308 aa9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 CHRM2P08172 466 aa9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 CST2P09228 141 aa9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 TMEM50BP56557 158 aa9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 TRA2AQ13595 282 aaKnown RBP eCLIP9.36□□□□□ -0.911e-5■■■■□ 21.3
TRAPPC12-223ENST00000497597 IGKV1D-8A0A087WSZ0 117 aa9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 A0A0A6YYD4 124 aa9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 A0A1W2PNV4 684 aa9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 RPS2P15880 293 aaKnown RBP9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 AKT2P31751 481 aa9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 COL10A1Q03692 680 aa9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 GPM6BQ13491 265 aa9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 ATG4DQ86TL0 474 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 ANKRD9Q96BM1 317 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 PGAM5Q96HS1 289 aa9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 ZNF665Q9H7R5 613 aa9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 PITPNC1Q9UKF7 332 aa9.36□□□□□ -0.91
TRAPPC12-223ENST00000497597 WISP1O95388 367 aa9.35□□□□□ -0.91
TRAPPC12-223ENST00000497597 GAPDHP04406 335 aaKnown RBP9.35□□□□□ -0.91
TRAPPC12-223ENST00000497597 SFTPDP35247 375 aa9.35□□□□□ -0.91
TRAPPC12-223ENST00000497597 RELQ04864 619 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC12-223ENST00000497597 HERPUD1Q15011 391 aa9.35□□□□□ -0.91
TRAPPC12-223ENST00000497597 OR1E3Q8WZA6 343 aa9.35□□□□□ -0.91
TRAPPC12-223ENST00000497597 ZNF524Q96C55 264 aa9.35□□□□□ -0.91
TRAPPC12-223ENST00000497597 APOOQ9BUR5 198 aa9.35□□□□□ -0.91
TRAPPC12-223ENST00000497597 H7BYZ3 331 aa9.35□□□□□ -0.91
TRAPPC12-223ENST00000497597 MASP2O00187 686 aa9.35□□□□□ -0.91
TRAPPC12-223ENST00000497597 CYR61O00622 381 aa9.35□□□□□ -0.91
TRAPPC12-223ENST00000497597 SRP19P09132 144 aaKnown RBP9.35□□□□□ -0.91
TRAPPC12-223ENST00000497597 CT45A8P0DMV1 189 aa9.35□□□□□ -0.91
TRAPPC12-223ENST00000497597 CT45A9P0DMV2 189 aa9.35□□□□□ -0.91
TRAPPC12-223ENST00000497597 TBPP20226 339 aa9.35□□□□□ -0.91
TRAPPC12-223ENST00000497597 RPS18P62269 152 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms