RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 MRPS30Q9NP92 439 aaKnown RBP1.65□□□□□ -2.15
CBX3-208ENST00000497498 RGS18Q9NS28 235 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 DDX18Q9NVP1 670 aaKnown RBP1.65□□□□□ -2.15
CBX3-208ENST00000497498 SLC2A8Q9NY64 477 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 ZNF226Q9NYT6 803 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 XCL2Q9UBD3 114 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 NDUFAF1Q9Y375 327 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 CSDC2Q9Y534 153 aaKnown RBP1.65□□□□□ -2.15
CBX3-208ENST00000497498 F11RQ9Y624 299 aaKnown RBP1.65□□□□□ -2.15
CBX3-208ENST00000497498 TCHHQ07283 1943 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 PLXNB2O15031 1838 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 ECM29Q5VYK3 1845 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 CDK5RAP2Q96SN8 1893 aa1.65□□□□□ -2.15
CBX3-208ENST00000497498 A0A1B0GUL6 1792 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 LRP4O75096 1905 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 SIP14410 1827 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 RFX7Q2KHR2 1363 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 IGHV3-64DA0A0J9YX35 117 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ZNF816-ZNF321PA0A0X1KG74 233 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 A0A1B0GTQ1 180 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 XKRY2A2RUG3 117 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ZNF98A6NK75 572 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 TMEM210A6NLX4 147 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ZNF726A6NNF4 738 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ATP6V1G2-DDX39BF2Z307 99 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 F8W036 122 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 H3BNH8 94 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 KCNK1O00180 336 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 CCRL2O00421 344 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 DNALI1O14645 258 aaPredicted RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 RAB29O14966 203 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ZBTB5O15062 677 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 AIREO43918 545 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 SOX15O60248 233 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 CST8O60676 142 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 SS18L1O75177 396 aaPredicted RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 BANF1O75531 89 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 CLPXO76031 633 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 MYO1DO94832 1006 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 CDK14O94921 469 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 RPP14O95059 124 aaKnown RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 CCNB2O95067 398 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 LDOC1O95751 146 aaPredicted RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 AIFM1O95831 613 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 IFNA10P01566 189 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 IGHV2-5P01817 119 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 SERPINA5P05154 406 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 C2P06681 752 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ACSM4P0C7M7 580 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 POLR2MP0CAP2 368 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 HSPD1P10809 573 aaKnown RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 MCF2P10911 925 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ANXA8P13928 327 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 S100PP25815 95 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 CD40LGP29965 261 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ERP29P30040 261 aaKnown RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 NUP62P37198 522 aaPredicted RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 CD79BP40259 229 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 SYKP43405 635 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 RFX3P48380 749 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 RAB13P51153 203 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 CCR8P51685 355 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ACLYP53396 1101 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 CEBPGP53567 150 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 TMBIM6P55061 237 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 SPCS3P61009 180 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 MAGOHP61326 146 aaKnown RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 SKP1P63208 163 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 CCNA1P78396 465 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 CAV1Q03135 178 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ZNF92Q03936 586 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 BST2Q10589 180 aaKnown RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 STX4Q12846 297 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 FADDQ13158 208 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 STX5Q13190 355 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 SLAQ13239 276 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 SLC39A6Q13433 755 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 APOFQ13790 326 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 PDK2Q15119 407 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 CDK10Q15131 360 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 HADHQ16836 314 aaKnown RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 EXOC3L4Q17RC7 722 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ZNF181Q2M3W8 571 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 HSD17B12Q53GQ0 312 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 THEM4Q5T1C6 240 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ANXA8L1Q5VT79 327 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 PPP1R2P3Q6NXS1 205 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 TMEM107Q6UX40 140 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ARPINQ7Z6K5 226 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 LRRC34Q8IZ02 419 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 SYCE1Q8N0S2 351 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 MS4A15Q8N5U1 240 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ZNF461Q8TAF7 563 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ZNF596Q8TC21 504 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 RAB2BQ8WUD1 216 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ELMO1Q92556 727 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 TMEM54Q969K7 222 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 CPNE4Q96A23 557 aaPredicted RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 MAGOHBQ96A72 148 aaKnown RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 PPWD1Q96BP3 646 aaKnown RBP1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms