RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 TMEM163Q8TC26 289 aa13.95□□□□□ -0.18
SMC4-226ENST00000497311 AJUBAQ96IF1 538 aa13.95□□□□□ -0.18
SMC4-226ENST00000497311 NRIP2Q9BQI9 281 aa13.95□□□□□ -0.18
SMC4-226ENST00000497311 ADGRL4Q9HBW9 690 aa13.95□□□□□ -0.18
SMC4-226ENST00000497311 RAB18Q9NP72 206 aa13.95□□□□□ -0.18
SMC4-226ENST00000497311 USE1Q9NZ43 259 aa13.95□□□□□ -0.18
SMC4-226ENST00000497311 OR14J1Q9UGF5 321 aa13.95□□□□□ -0.18
SMC4-226ENST00000497311 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMC4-226ENST00000497311 DHRS7CA6NNS2 312 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 ZAR1LA6NP61 321 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 G3V2T6 193 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 MITFO75030 526 aaPredicted RBP13.94□□□□□ -0.18
SMC4-226ENST00000497311 TK1P04183 234 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 CSF1P09603 554 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 MPZP25189 248 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 KIR2DS4P43632 304 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 LGALS4P56470 323 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 ERVFRD-1P60508 538 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 C12orf73Q69YU5 71 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 TET2Q6N021 2002 aaPredicted RBP13.94□□□□□ -0.18
SMC4-226ENST00000497311 Q6ZTK2 550 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 CALHM1Q8IU99 346 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 GID4Q8IVV7 300 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 BATF2Q8N1L9 274 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 C11orf42Q8N5U0 333 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 OR4C13Q8NGP0 309 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 PPP1R35Q8TAP8 253 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 IL4I1Q96RQ9 567 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 HES4Q9HCC6 221 aa13.94□□□□□ -0.18
SMC4-226ENST00000497311 MRM2Q9UI43 246 aaKnown RBP13.94□□□□□ -0.18
SMC4-226ENST00000497311 RPP14O95059 124 aaKnown RBP13.93□□□□□ -0.18
SMC4-226ENST00000497311 KRT8P05787 483 aa13.93□□□□□ -0.18
SMC4-226ENST00000497311 CCL3L1P16619 93 aa13.93□□□□□ -0.18
SMC4-226ENST00000497311 COX7A1P24310 79 aa13.93□□□□□ -0.18
SMC4-226ENST00000497311 PAX6P26367 422 aa13.93□□□□□ -0.18
SMC4-226ENST00000497311 EPHA2P29317 976 aa13.93□□□□□ -0.18
SMC4-226ENST00000497311 HERPUD1Q15011 391 aa13.93□□□□□ -0.18
SMC4-226ENST00000497311 C11orf88Q6PI97 169 aa13.93□□□□□ -0.18
SMC4-226ENST00000497311 Q6ZSR3 168 aa13.93□□□□□ -0.18
SMC4-226ENST00000497311 AMIGO2Q86SJ2 522 aa13.93□□□□□ -0.18
SMC4-226ENST00000497311 ANGPTL5Q86XS5 388 aa13.93□□□□□ -0.18
SMC4-226ENST00000497311 ZDHHC13Q8IUH4 622 aa13.93□□□□□ -0.18
SMC4-226ENST00000497311 YIPF7Q8N8F6 280 aa13.93□□□□□ -0.18
SMC4-226ENST00000497311 SLC7A11Q9UPY5 501 aa13.93□□□□□ -0.18
SMC4-226ENST00000497311 SLC22A13Q9Y226 551 aa13.93□□□□□ -0.18
SMC4-226ENST00000497311 SIGLEC9Q9Y336 463 aa13.93□□□□□ -0.18
SMC4-226ENST00000497311 CCL1P22362 96 aa13.92□□□□□ -0.18
SMC4-226ENST00000497311 BMXP51813 675 aa13.92□□□□□ -0.18
SMC4-226ENST00000497311 EFNB2P52799 333 aa13.92□□□□□ -0.18
SMC4-226ENST00000497311 ERVK11-1P61568 191 aa13.92□□□□□ -0.18
SMC4-226ENST00000497311 IL24Q13007 206 aa13.92□□□□□ -0.18
SMC4-226ENST00000497311 ZNF273Q14593 569 aa13.92□□□□□ -0.18
SMC4-226ENST00000497311 KDM4DQ6B0I6 523 aa13.92□□□□□ -0.18
SMC4-226ENST00000497311 CRIP3Q6Q6R5 217 aa13.92□□□□□ -0.18
SMC4-226ENST00000497311 LIAT1Q6ZQX7 453 aa13.92□□□□□ -0.18
SMC4-226ENST00000497311 DTX3Q8N9I9 347 aa13.92□□□□□ -0.18
SMC4-226ENST00000497311 OR2T6Q8NHC8 308 aa13.92□□□□□ -0.18
SMC4-226ENST00000497311 TRMT10AQ8TBZ6 339 aaKnown RBP13.92□□□□□ -0.18
SMC4-226ENST00000497311 CENPNQ96H22 339 aaPredicted RBP13.92□□□□□ -0.18
SMC4-226ENST00000497311 TBX5Q99593 518 aa13.92□□□□□ -0.18
SMC4-226ENST00000497311 PKIBQ9C010 78 aa13.92□□□□□ -0.18
SMC4-226ENST00000497311 RANBP3Q9H6Z4 567 aaPredicted RBP13.92□□□□□ -0.18
SMC4-226ENST00000497311 PLEKHA1Q9HB21 404 aa13.92□□□□□ -0.18
SMC4-226ENST00000497311 WARS2Q9UGM6 360 aaKnown RBP13.92□□□□□ -0.18
SMC4-226ENST00000497311 ENOPH1Q9UHY7 261 aa13.92□□□□□ -0.18
SMC4-226ENST00000497311 FAM230AA0A1W2PPH8 454 aa13.91□□□□□ -0.18
SMC4-226ENST00000497311 K7N7A8 449 aa13.91□□□□□ -0.18
SMC4-226ENST00000497311 PIPP12273 146 aaPredicted RBP13.91□□□□□ -0.18
SMC4-226ENST00000497311 COL10A1Q03692 680 aa13.91□□□□□ -0.18
SMC4-226ENST00000497311 KPNB1Q14974 876 aaKnown RBP13.91□□□□□ -0.18
SMC4-226ENST00000497311 ODF4Q2M2E3 257 aa13.91□□□□□ -0.18
SMC4-226ENST00000497311 ZNF782Q6ZMW2 699 aaPredicted RBP13.91□□□□□ -0.18
SMC4-226ENST00000497311 SSX6Q7RTT6 188 aa13.91□□□□□ -0.18
SMC4-226ENST00000497311 ASCC1Q8N9N2 400 aaKnown RBP13.91□□□□□ -0.18
SMC4-226ENST00000497311 NPFFR1Q9GZQ6 430 aa13.91□□□□□ -0.18
SMC4-226ENST00000497311 GABARAPL1Q9H0R8 117 aa13.91□□□□□ -0.18
SMC4-226ENST00000497311 C17orf98A8MV24 154 aa13.9□□□□□ -0.18
SMC4-226ENST00000497311 SYT7O43581 403 aa13.9□□□□□ -0.18
SMC4-226ENST00000497311 CHRM2P08172 466 aa13.9□□□□□ -0.18
SMC4-226ENST00000497311 OR2T7P0C7T2 308 aa13.9□□□□□ -0.18
SMC4-226ENST00000497311 LHFPL4Q7Z7J7 247 aa13.9□□□□□ -0.18
SMC4-226ENST00000497311 CATSPERDQ86XM0 798 aa13.9□□□□□ -0.18
SMC4-226ENST00000497311 C1QL4Q86Z23 238 aa13.9□□□□□ -0.18
SMC4-226ENST00000497311 OR13D1Q8NGV5 346 aa13.9□□□□□ -0.18
SMC4-226ENST00000497311 PIFOQ8TCI5 191 aa13.9□□□□□ -0.18
SMC4-226ENST00000497311 PYDC1Q8WXC3 89 aa13.9□□□□□ -0.18
SMC4-226ENST00000497311 CEP19Q96LK0 163 aa13.9□□□□□ -0.18
SMC4-226ENST00000497311 ADI1Q9BV57 179 aa13.9□□□□□ -0.18
SMC4-226ENST00000497311 FOXJ3Q9UPW0 622 aa13.9□□□□□ -0.18
SMC4-226ENST00000497311 A0A1W2PQL4 384 aaPredicted RBP13.89□□□□□ -0.19
SMC4-226ENST00000497311 METTL15A6NJ78 407 aa13.89□□□□□ -0.19
SMC4-226ENST00000497311 FAM90A8PA6NJQ4 464 aa13.89□□□□□ -0.19
SMC4-226ENST00000497311 H3BSH0 61 aa13.89□□□□□ -0.19
SMC4-226ENST00000497311 HTR1FP30939 366 aa13.89□□□□□ -0.19
SMC4-226ENST00000497311 FUT6P51993 359 aa13.89□□□□□ -0.19
SMC4-226ENST00000497311 DLX6P56179 175 aa13.89□□□□□ -0.19
SMC4-226ENST00000497311 EDDM3BP56851 147 aa13.89□□□□□ -0.19
SMC4-226ENST00000497311 UBE2V2Q15819 145 aa13.89□□□□□ -0.19
SMC4-226ENST00000497311 ZFP1Q6P2D0 407 aa13.89□□□□□ -0.19
SMC4-226ENST00000497311 GDPD3Q7L5L3 318 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms