RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CMSS1Q9BQ75 279 aaKnown RBP11.29□□□□□ -0.6
GARNL3-220ENST00000496711 FAAP24Q9BTP7 215 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 NMES1Q9C002 83 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 RAB18Q9NP72 206 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 PCDHB16Q9NRJ7 776 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 ANXA10Q9UJ72 324 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 C14orf166Q9Y224 244 aaKnown RBP11.29□□□□□ -0.6
GARNL3-220ENST00000496711 C13orf42A0A1B0GVH6 325 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 hCG_1807616A0A1W2PRN6 198 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 RNF222A6NCQ9 220 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 MSTNO14793 375 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 GEMIN2O14893 280 aaKnown RBP11.28□□□□□ -0.6
GARNL3-220ENST00000496711 PGAM2P15259 253 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 CCNOP22674 350 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 ARG2P78540 354 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 CYCSP99999 105 aaKnown RBP11.28□□□□□ -0.6
GARNL3-220ENST00000496711 SLC10A1Q14973 349 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 ATXN7L3Q14CW9 347 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-220ENST00000496711 PIGYQ3MUY2 71 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 ACOT7LQ6ZUV0 252 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-220ENST00000496711 GLRX5Q86SX6 157 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 FBXL14Q8N1E6 418 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 OR10AD1Q8NGE0 317 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 OR56B2PQ8NGI1 322 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 ST8SIA2Q92186 375 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 VRK1Q99986 396 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-220ENST00000496711 SULT4A1Q9BR01 284 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 CHMP1AQ9HD42 196 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-220ENST00000496711 MBD2Q9UBB5 411 aa11.28□□□□□ -0.6
GARNL3-220ENST00000496711 C5orf49A4QMS7 147 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 ZNF503-AS2A6NEH8 195 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 ZNF850A8MQ14 1090 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 GALR2O43603 387 aaPredicted RBP11.27□□□□□ -0.6
GARNL3-220ENST00000496711 SFTPBP07988 381 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 FCGR3AP08637 254 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 CD79AP11912 226 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 ARR3P36575 388 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 RRADP55042 308 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 TGIF1Q15583 401 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 ZNF766Q5HY98 468 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 MRPL21Q7Z2W9 205 aaKnown RBP11.27□□□□□ -0.6
GARNL3-220ENST00000496711 NUFIP2Q7Z417 695 aaKnown RBP11.27□□□□□ -0.6
GARNL3-220ENST00000496711 PIP4P1Q86T03 277 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 ZNF611Q8N823 705 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 TMEM178AQ8NBL3 297 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 OR51F2Q8NH61 342 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 APOBEC3DQ96AK3 386 aaPredicted RBP11.27□□□□□ -0.6
GARNL3-220ENST00000496711 ZNF2Q9BSG1 426 aaPredicted RBP11.27□□□□□ -0.6
GARNL3-220ENST00000496711 REPIN1Q9BWE0 567 aaKnown RBP11.27□□□□□ -0.6
GARNL3-220ENST00000496711 PAPOLGQ9BWT3 736 aaKnown RBP11.27□□□□□ -0.6
GARNL3-220ENST00000496711 LDAHQ9H6V9 325 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 MED9Q9NWA0 146 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 ZNF581Q9P0T4 197 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 GPR160Q9UJ42 338 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 ST3GAL6Q9Y274 331 aa11.27□□□□□ -0.6
GARNL3-220ENST00000496711 POM121CA8CG34 1229 aa11.27□□□□□ -0.61
GARNL3-220ENST00000496711 PDGFAP04085 211 aa11.27□□□□□ -0.61
GARNL3-220ENST00000496711 RLN2P04090 185 aa11.27□□□□□ -0.61
GARNL3-220ENST00000496711 RPS2P15880 293 aaKnown RBP11.27□□□□□ -0.61
GARNL3-220ENST00000496711 GLRA1P23415 457 aa11.27□□□□□ -0.61
GARNL3-220ENST00000496711 PSMB6P28072 239 aa11.27□□□□□ -0.61
GARNL3-220ENST00000496711 RBM11P57052 281 aaKnown RBP11.27□□□□□ -0.61
GARNL3-220ENST00000496711 MALLQ13021 153 aa11.27□□□□□ -0.61
GARNL3-220ENST00000496711 ANKRD55Q3KP44 614 aa11.27□□□□□ -0.61
GARNL3-220ENST00000496711 CALHM1Q8IU99 346 aa11.27□□□□□ -0.61
GARNL3-220ENST00000496711 INO80EQ8NBZ0 244 aaPredicted RBP11.27□□□□□ -0.61
GARNL3-220ENST00000496711 OR5M9Q8NGP3 310 aa11.27□□□□□ -0.61
GARNL3-220ENST00000496711 CXorf58Q96LI9 332 aa11.27□□□□□ -0.61
GARNL3-220ENST00000496711 NECAP2Q9NVZ3 263 aa11.27□□□□□ -0.61
GARNL3-220ENST00000496711 SS18L1O75177 396 aaPredicted RBP11.26□□□□□ -0.61
GARNL3-220ENST00000496711 PDCD6O75340 191 aa11.26□□□□□ -0.61
GARNL3-220ENST00000496711 CCL2P13500 99 aa11.26□□□□□ -0.61
GARNL3-220ENST00000496711 RAB1AP62820 205 aa11.26□□□□□ -0.61
GARNL3-220ENST00000496711 PRDX4Q13162 271 aa11.26□□□□□ -0.61
GARNL3-220ENST00000496711 RGS7BPQ6MZT1 257 aaPredicted RBP11.26□□□□□ -0.61
GARNL3-220ENST00000496711 SUMF1Q8NBK3 374 aa11.26□□□□□ -0.61
GARNL3-220ENST00000496711 RBPMSQ93062 196 aaKnown RBP11.26□□□□□ -0.61
GARNL3-220ENST00000496711 WBP1Q96G27 269 aa11.26□□□□□ -0.61
GARNL3-220ENST00000496711 DEFB127Q9H1M4 99 aa11.26□□□□□ -0.61
GARNL3-220ENST00000496711 PRR13Q9NZ81 148 aa11.26□□□□□ -0.61
GARNL3-220ENST00000496711 CSAG2Q9Y5P2 127 aa11.26□□□□□ -0.61
GARNL3-220ENST00000496711 TRGV5A0A0B4J1U4 118 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 PQLC2LA1A4F0 135 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 SHOXO15266 292 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 ADAP1O75689 374 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 CTSDP07339 412 aaPredicted RBP11.25□□□□□ -0.61
GARNL3-220ENST00000496711 OR5H8P0DN80 308 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 PTGER4P35408 488 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 SOX8P57073 446 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 PLP2Q04941 152 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 PLEKHN1Q494U1 663 aaPredicted RBP11.25□□□□□ -0.61
GARNL3-220ENST00000496711 SLC25A26Q70HW3 274 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 ZDHHC23Q8IYP9 409 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 DCUN1D4Q92564 292 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 DYRK2Q92630 601 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 POM121Q96HA1 1249 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 WDYHV1Q96HA8 205 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 POM121L2Q96KW2 1035 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 OPA3Q9H6K4 179 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms