RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	PHF21A	Q96BD5	680 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	NRIP2	Q9BQI9	281 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	TMEM59	Q9BXS4	323 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	SLIRP	Q9GZT3	109 aa	Known RBP	11.45	□□□□□ -0.58
APTX-231	ENST00000494973	UFSP2	Q9NUQ7	469 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	RAB22A	Q9UL26	194 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973	PEX16	Q9Y5Y5	336 aa		11.45	□□□□□ -0.58
APTX-231	ENST00000494973		A0A0A6YYH2	397 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	FAM90A10P	A6NDY2	464 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	FAM90A18P	A6NE21	464 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	FAM90A16P	A6NEW6	464 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	FAM90A20P	A6NIJ5	464 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973		A6NJ64	397 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	FAM90A8P	A6NJQ4	464 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	FAM90A7P	A6NKC0	464 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	FAM90A22P	A8MWA6	464 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	FAM90A12P	A8MX19	464 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	FAM90A5P	A8MXJ8	464 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	FAM90A23P	A8MXZ1	464 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	SRRM5	B3KS81	715 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	AKR7A2	O43488	359 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	SPRY1	O43609	319 aa	Predicted RBP	11.44	□□□□□ -0.58
APTX-231	ENST00000494973	NXPH2	O95156	264 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	F12	P00748	615 aa	Predicted RBP	11.44	□□□□□ -0.58
APTX-231	ENST00000494973	FAM90A15P	P0C7V4	464 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	FAM90A13P	P0C7W8	464 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	FAM90A14P	P0C7W9	464 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	FAM90A24P	P0C7X0	464 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	SLC2A2	P11168	524 aa	Predicted RBP	11.44	□□□□□ -0.58
APTX-231	ENST00000494973	GLRA1	P23415	457 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	CPT2	P23786	658 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	DNASE1	P24855	282 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	CAV3	P56539	151 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	ARL6IP1	Q15041	203 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	P2RY14	Q15391	338 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	MPPED2	Q15777	294 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	SLC22A6	Q4U2R8	563 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	DMRTC1	Q5HYR2	192 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	UBE2NL	Q5JXB2	153 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	RAB12	Q6IQ22	244 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	OSR2	Q8N2R0	312 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	OR51D1	Q8NGF3	324 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	LGALS14	Q8TCE9	139 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	RAB40A	Q8WXH6	277 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	SLAMF9	Q96A28	289 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	TIMD4	Q96H15	378 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	BARHL1	Q9BZE3	327 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.44	□□□□□ -0.58
APTX-231	ENST00000494973	NXF2	Q9GZY0	626 aa	Known RBP	11.44	□□□□□ -0.58
APTX-231	ENST00000494973	TMEM106B	Q9NUM4	274 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	ZNF701	Q9NV72	531 aa	Predicted RBP	11.44	□□□□□ -0.58
APTX-231	ENST00000494973	BEX4	Q9NWD9	120 aa	Predicted RBP	11.44	□□□□□ -0.58
APTX-231	ENST00000494973	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.44	□□□□□ -0.58
APTX-231	ENST00000494973	RABL2B	Q9UNT1	228 aa		11.44	□□□□□ -0.58
APTX-231	ENST00000494973	TANC2	Q9HCD6	1990 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	CACNA1D	Q01668	2161 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	TMEM14DP	A8MWL7	114 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	CLDN25	C9JDP6	229 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	SYNGR1	O43759	233 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	ANGPTL7	O43827	346 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	CRTAP	O75718	401 aa	Predicted RBP	11.43	□□□□□ -0.58
APTX-231	ENST00000494973	HTR3B	O95264	441 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	APOA1	P02647	267 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	DAO	P14920	347 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	MUC1	P15941	1255 aa	Predicted RBP	11.43	□□□□□ -0.58
APTX-231	ENST00000494973	MGMT	P16455	207 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	SERPINA2	P20848	420 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	TALDO1	P37837	337 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	CDKN1A	P38936	164 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	ART1	P52961	327 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	IL13RA2	Q14627	380 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	MPV17L	Q2QL34	196 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	C2orf76	Q3KRA6	126 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	CRIP3	Q6Q6R5	217 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	C11orf53	Q8IXP5	236 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	FAM58A	Q8N1B3	248 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.43	□□□□□ -0.58
APTX-231	ENST00000494973	EMG1	Q92979	244 aa	Known RBP	11.43	□□□□□ -0.58
APTX-231	ENST00000494973	GSX2	Q9BZM3	304 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	CHODL	Q9H9P2	273 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	SEBOX	Q9HB31	216 aa	Predicted RBP	11.43	□□□□□ -0.58
APTX-231	ENST00000494973	SPACA1	Q9HBV2	294 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	HES4	Q9HCC6	221 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	DNAJB11	Q9UBS4	358 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	OR5V1	Q9UGF6	321 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	PLEKHA6	Q9Y2H5	1048 aa		11.43	□□□□□ -0.58
APTX-231	ENST00000494973	TRAV38-1	A0A0B4J264	116 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	LDLRAD4	O15165	306 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	RGS5	O15539	181 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	CDC14B	O60729	498 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	RHBDL1	O75783	438 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	CLPX	O76031	633 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	MPIG6B	O95866	241 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	KNG1	P01042	644 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	HPX	P02790	462 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	CHRM2	P08172	466 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	VSIG8	P0DPA2	414 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	SNRPB	P14678	240 aa	Known RBP	11.42	□□□□□ -0.58
APTX-231	ENST00000494973	BCL3	P20749	454 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	CLDN12	P56749	244 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms