RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CXCR4P61073 352 aa18.82■□□□□ 0.6
COL27A1-208ENST00000494780 ESRRGP62508 458 aa18.82■□□□□ 0.6
COL27A1-208ENST00000494780 FLOT2Q14254 428 aa18.82■□□□□ 0.6
COL27A1-208ENST00000494780 KPRPQ5T749 579 aaPredicted RBP18.82■□□□□ 0.6
COL27A1-208ENST00000494780 BCL2L15Q5TBC7 163 aa18.82■□□□□ 0.6
COL27A1-208ENST00000494780 MEPCEQ7L2J0 689 aaKnown RBP18.82■□□□□ 0.6
COL27A1-208ENST00000494780 OR14K1Q8NGZ2 314 aa18.82■□□□□ 0.6
COL27A1-208ENST00000494780 APOL4Q9BPW4 351 aa18.82■□□□□ 0.6
COL27A1-208ENST00000494780 CDCA4Q9BXL8 241 aa18.82■□□□□ 0.6
COL27A1-208ENST00000494780 OR14J1Q9UGF5 321 aa18.82■□□□□ 0.6
COL27A1-208ENST00000494780 OR52A1Q9UKL2 312 aa18.82■□□□□ 0.6
COL27A1-208ENST00000494780 A0A1B0GTI1 187 aa18.81■□□□□ 0.6
COL27A1-208ENST00000494780 C17orf98A8MV24 154 aa18.81■□□□□ 0.6
COL27A1-208ENST00000494780 VSIG10L2P0DP72 767 aa18.81■□□□□ 0.6
COL27A1-208ENST00000494780 ERVK11-1P61568 191 aa18.81■□□□□ 0.6
COL27A1-208ENST00000494780 PTGES3Q15185 160 aaKnown RBP18.81■□□□□ 0.6
COL27A1-208ENST00000494780 SAMD5Q5TGI4 173 aa18.81■□□□□ 0.6
COL27A1-208ENST00000494780 FAHD1Q6P587 224 aa18.81■□□□□ 0.6
COL27A1-208ENST00000494780 ZNF782Q6ZMW2 699 aaPredicted RBP18.81■□□□□ 0.6
COL27A1-208ENST00000494780 Q6ZSR3 168 aa18.81■□□□□ 0.6
COL27A1-208ENST00000494780 LHFPL4Q7Z7J7 247 aa18.81■□□□□ 0.6
COL27A1-208ENST00000494780 SLC35F2Q8IXU6 374 aa18.81■□□□□ 0.6
COL27A1-208ENST00000494780 NKX3-1Q99801 234 aaPredicted RBP18.81■□□□□ 0.6
COL27A1-208ENST00000494780 PKIBQ9C010 78 aa18.81■□□□□ 0.6
COL27A1-208ENST00000494780 H2AFY2Q9P0M6 372 aaPredicted RBP18.81■□□□□ 0.6
COL27A1-208ENST00000494780 TBL2Q9Y4P3 447 aaKnown RBP18.81■□□□□ 0.6
COL27A1-208ENST00000494780 TCRBV3S1A0A5B6 114 aa18.8■□□□□ 0.6
COL27A1-208ENST00000494780 K7N7A8 449 aa18.8■□□□□ 0.6
COL27A1-208ENST00000494780 DLX6P56179 175 aa18.8■□□□□ 0.6
COL27A1-208ENST00000494780 IL24Q13007 206 aa18.8■□□□□ 0.6
COL27A1-208ENST00000494780 HIST2H2BDQ6DRA6 164 aa18.8■□□□□ 0.6
COL27A1-208ENST00000494780 FOXRED1Q96CU9 486 aaPredicted RBP18.8■□□□□ 0.6
COL27A1-208ENST00000494780 ZNF702PQ9H963 129 aa18.8■□□□□ 0.6
COL27A1-208ENST00000494780 SNX5Q9Y5X3 404 aa18.8■□□□□ 0.6
COL27A1-208ENST00000494780 ZNF670-ZNF695F2Z2N8 137 aa18.79■□□□□ 0.6
COL27A1-208ENST00000494780 RBP4P02753 201 aa18.79■□□□□ 0.6
COL27A1-208ENST00000494780 PIPP12273 146 aaPredicted RBP18.79■□□□□ 0.6
COL27A1-208ENST00000494780 DAPP51397 102 aa18.79■□□□□ 0.6
COL27A1-208ENST00000494780 FBLN7Q53RD9 439 aa18.79■□□□□ 0.6
COL27A1-208ENST00000494780 AADACL4Q5VUY2 407 aa18.79■□□□□ 0.6
COL27A1-208ENST00000494780 NXNL2Q5VZ03 156 aa18.79■□□□□ 0.6
COL27A1-208ENST00000494780 BCDIN3DQ7Z5W3 292 aaKnown RBP18.79■□□□□ 0.6
COL27A1-208ENST00000494780 BATF2Q8N1L9 274 aa18.79■□□□□ 0.6
COL27A1-208ENST00000494780 Q8N2B8 174 aa18.79■□□□□ 0.6
COL27A1-208ENST00000494780 OR13D1Q8NGV5 346 aa18.79■□□□□ 0.6
COL27A1-208ENST00000494780 MALSU1Q96EH3 234 aa18.79■□□□□ 0.6
COL27A1-208ENST00000494780 ADGRL4Q9HBW9 690 aa18.79■□□□□ 0.6
COL27A1-208ENST00000494780 CLN6Q9NWW5 311 aa18.79■□□□□ 0.6
COL27A1-208ENST00000494780 TCF19Q9Y242 345 aa18.79■□□□□ 0.6
COL27A1-208ENST00000494780 ODF3BA8MYP8 253 aa18.78■□□□□ 0.6
COL27A1-208ENST00000494780 MAGEB4O15481 346 aaPredicted RBP18.78■□□□□ 0.6
COL27A1-208ENST00000494780 PLXNB1O43157 2135 aa18.78■□□□□ 0.6
COL27A1-208ENST00000494780 CHRM2P08172 466 aa18.78■□□□□ 0.6
COL27A1-208ENST00000494780 COL10A1Q03692 680 aa18.78■□□□□ 0.6
COL27A1-208ENST00000494780 DNAL1Q4LDG9 190 aa18.78■□□□□ 0.6
COL27A1-208ENST00000494780 ANGPTL5Q86XS5 388 aa18.78■□□□□ 0.6
COL27A1-208ENST00000494780 DYNAPQ8N1N2 210 aa18.78■□□□□ 0.6
COL27A1-208ENST00000494780 ASCC1Q8N9N2 400 aaKnown RBP18.78■□□□□ 0.6
COL27A1-208ENST00000494780 ABCB10Q9NRK6 738 aa18.78■□□□□ 0.6
COL27A1-208ENST00000494780 MRM2Q9UI43 246 aaKnown RBP18.78■□□□□ 0.6
COL27A1-208ENST00000494780 SLC7A11Q9UPY5 501 aa18.78■□□□□ 0.6
COL27A1-208ENST00000494780 SLC22A13Q9Y226 551 aa18.78■□□□□ 0.6
COL27A1-208ENST00000494780 A6NIN4 97 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 GYG2O15488 501 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 FBXO24O75426 580 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 ARG1P05089 322 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 ZNF728P0DKX0 622 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 CCL1P22362 96 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 EFNB1P98172 346 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 EMX1Q04741 257 aaPredicted RBP18.77■□□□□ 0.6
COL27A1-208ENST00000494780 FAM189A2Q15884 450 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 PLA1AQ53H76 456 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 SLX4IPQ5VYV7 408 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 ZNF626Q68DY1 528 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 PLEKHG7Q6ZR37 379 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 TCEANCQ8N8B7 351 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 OR11H6Q8NGC7 330 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 TMEM163Q8TC26 289 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 RPS4Y2Q8TD47 263 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 SERTAD4Q9NUC0 356 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 PITPNC1Q9UKF7 332 aa18.77■□□□□ 0.6
COL27A1-208ENST00000494780 A6NDX4 124 aa18.76■□□□□ 0.59
COL27A1-208ENST00000494780 ZNF737O75373 536 aa18.76■□□□□ 0.59
COL27A1-208ENST00000494780 RAB13P51153 203 aa18.76■□□□□ 0.59
COL27A1-208ENST00000494780 CNN3Q15417 329 aaKnown RBP18.76■□□□□ 0.59
COL27A1-208ENST00000494780 CCBE1Q6UXH8 406 aaPredicted RBP18.76■□□□□ 0.59
COL27A1-208ENST00000494780 GDPD3Q7L5L3 318 aa18.76■□□□□ 0.59
COL27A1-208ENST00000494780 REC114Q7Z4M0 266 aa18.76■□□□□ 0.59
COL27A1-208ENST00000494780 TRMT10AQ8TBZ6 339 aaKnown RBP18.76■□□□□ 0.59
COL27A1-208ENST00000494780 UTP4Q969X6 686 aaKnown RBP18.76■□□□□ 0.59
COL27A1-208ENST00000494780 POMPQ9Y244 141 aa18.76■□□□□ 0.59
COL27A1-208ENST00000494780 FAM230AA0A1W2PPH8 454 aa18.75■□□□□ 0.59
COL27A1-208ENST00000494780 M0R129 80 aa18.75■□□□□ 0.59
COL27A1-208ENST00000494780 KRT8P05787 483 aa18.75■□□□□ 0.59
COL27A1-208ENST00000494780 EDDM3BP56851 147 aa18.75■□□□□ 0.59
COL27A1-208ENST00000494780 SSX2Q16385 188 aa18.75■□□□□ 0.59
COL27A1-208ENST00000494780 GID4Q8IVV7 300 aa18.75■□□□□ 0.59
COL27A1-208ENST00000494780 OR4S1Q8NGB4 309 aa18.75■□□□□ 0.59
COL27A1-208ENST00000494780 CEP19Q96LK0 163 aa18.75■□□□□ 0.59
COL27A1-208ENST00000494780 PRSS22Q9GZN4 317 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms