RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 STMN2Q93045 179 aa27.27■■□□□ 1.96
CBX4-203ENST00000494546 C4orf36Q96KX1 117 aa27.27■■□□□ 1.96
CBX4-203ENST00000494546 HES4Q9HCC6 221 aa27.27■■□□□ 1.96
CBX4-203ENST00000494546 TENM1Q9UKZ4 2725 aa27.27■■□□□ 1.96
CBX4-203ENST00000494546 IGKV1-27A0A075B6S5 117 aa27.26■■□□□ 1.95
CBX4-203ENST00000494546 TRBV23-1A0A0A0MS06 115 aa27.26■■□□□ 1.95
CBX4-203ENST00000494546 M0R1W7 72 aa27.26■■□□□ 1.95
CBX4-203ENST00000494546 ACTA2P62736 377 aa27.26■■□□□ 1.95
CBX4-203ENST00000494546 ACTG2P63267 376 aa27.26■■□□□ 1.95
CBX4-203ENST00000494546 GUCA2AQ02747 115 aa27.26■■□□□ 1.95
CBX4-203ENST00000494546 KLRD1Q13241 179 aa27.26■■□□□ 1.95
CBX4-203ENST00000494546 BLMHQ13867 455 aa27.26■■□□□ 1.95
CBX4-203ENST00000494546 FDX2Q6P4F2 183 aa27.26■■□□□ 1.95
CBX4-203ENST00000494546 LHFPL3Q86UP9 236 aa27.26■■□□□ 1.95
CBX4-203ENST00000494546 ZNF561Q8N587 486 aa27.26■■□□□ 1.95
CBX4-203ENST00000494546 C10orf35Q96D05 121 aa27.26■■□□□ 1.95
CBX4-203ENST00000494546 BORCS8Q96FH0 119 aa27.26■■□□□ 1.95
CBX4-203ENST00000494546 MRPL48Q96GC5 212 aaKnown RBP27.26■■□□□ 1.95
CBX4-203ENST00000494546 A0A1W2PRD5 423 aa27.25■■□□□ 1.95
CBX4-203ENST00000494546 A0A1W2PRF3 423 aa27.25■■□□□ 1.95
CBX4-203ENST00000494546 A0A1W2PRM7 423 aa27.25■■□□□ 1.95
CBX4-203ENST00000494546 RNASEK-C17orf49H0YIS7 233 aa27.25■■□□□ 1.95
CBX4-203ENST00000494546 INMTO95050 263 aa27.25■■□□□ 1.95
CBX4-203ENST00000494546 EEF1B2P24534 225 aaKnown RBP27.25■■□□□ 1.95
CBX4-203ENST00000494546 CNN3Q15417 329 aaKnown RBP27.25■■□□□ 1.95
CBX4-203ENST00000494546 PP6455Q8WZ26 134 aa27.25■■□□□ 1.95
CBX4-203ENST00000494546 ADAT3Q96EY9 351 aaPredicted RBP27.25■■□□□ 1.95
CBX4-203ENST00000494546 PELI1Q96FA3 418 aa27.25■■□□□ 1.95
CBX4-203ENST00000494546 ALG8Q9BVK2 526 aa27.25■■□□□ 1.95
CBX4-203ENST00000494546 CHIAQ9BZP6 476 aa27.25■■□□□ 1.95
CBX4-203ENST00000494546 C19orf12Q9NSK7 152 aa27.25■■□□□ 1.95
CBX4-203ENST00000494546 MYRFQ9Y2G1 1151 aa27.25■■□□□ 1.95
CBX4-203ENST00000494546 FAM96BQ9Y3D0 163 aa27.25■■□□□ 1.95
CBX4-203ENST00000494546 ERVK11-1P61568 191 aa27.24■■□□□ 1.95
CBX4-203ENST00000494546 FIP1L1Q6UN15 594 aaKnown RBP27.24■■□□□ 1.95
CBX4-203ENST00000494546 C1orf122Q6ZSJ8 110 aa27.24■■□□□ 1.95
CBX4-203ENST00000494546 TMEM86BQ8N661 226 aa27.24■■□□□ 1.95
CBX4-203ENST00000494546 SSMEM1Q8WWF3 244 aa27.24■■□□□ 1.95
CBX4-203ENST00000494546 SLAMF9Q96A28 289 aa27.24■■□□□ 1.95
CBX4-203ENST00000494546 FGGYQ96C11 551 aa27.24■■□□□ 1.95
CBX4-203ENST00000494546 METTL8Q9H825 291 aaKnown RBP27.24■■□□□ 1.95
CBX4-203ENST00000494546 FAM181BA6NEQ2 426 aa27.23■■□□□ 1.95
CBX4-203ENST00000494546 ISG15P05161 165 aa27.23■■□□□ 1.95
CBX4-203ENST00000494546 ZNF20P17024 532 aa27.23■■□□□ 1.95
CBX4-203ENST00000494546 GALEQ14376 348 aa27.23■■□□□ 1.95
CBX4-203ENST00000494546 ZSCAN26Q16670 478 aa27.23■■□□□ 1.95
CBX4-203ENST00000494546 TBC1D15Q8TC07 691 aa27.23■■□□□ 1.95
CBX4-203ENST00000494546 TNFRSF14Q92956 283 aa27.23■■□□□ 1.95
CBX4-203ENST00000494546 CEP19Q96LK0 163 aa27.23■■□□□ 1.95
CBX4-203ENST00000494546 MYCBPQ99417 103 aaPredicted RBP27.23■■□□□ 1.95
CBX4-203ENST00000494546 MTCH1Q9NZJ7 389 aa27.23■■□□□ 1.95
CBX4-203ENST00000494546 POMT1Q9Y6A1 747 aa27.23■■□□□ 1.95
CBX4-203ENST00000494546 H0YAE9 185 aa27.22■■□□□ 1.95
CBX4-203ENST00000494546 FADS2O95864 444 aaKnown RBP27.22■■□□□ 1.95
CBX4-203ENST00000494546 KNG1P01042 644 aa27.22■■□□□ 1.95
CBX4-203ENST00000494546 OMGP23515 440 aa27.22■■□□□ 1.95
CBX4-203ENST00000494546 CCR9P51686 369 aa27.22■■□□□ 1.95
CBX4-203ENST00000494546 SLC25A26Q70HW3 274 aa27.22■■□□□ 1.95
CBX4-203ENST00000494546 ZNF555Q8NEP9 628 aa27.22■■□□□ 1.95
CBX4-203ENST00000494546 SMPD3Q9NY59 655 aaPredicted RBP27.22■■□□□ 1.95
CBX4-203ENST00000494546 CAB39Q9Y376 341 aaPredicted RBP27.22■■□□□ 1.95
CBX4-203ENST00000494546 F8VVB4 439 aa27.21■■□□□ 1.95
CBX4-203ENST00000494546 F8VWA3 439 aa27.21■■□□□ 1.95
CBX4-203ENST00000494546 NPFFO15130 113 aa27.21■■□□□ 1.95
CBX4-203ENST00000494546 IGHV4-59P01825 116 aa27.21■■□□□ 1.95
CBX4-203ENST00000494546 CRYBA1P05813 215 aa27.21■■□□□ 1.95
CBX4-203ENST00000494546 RPL31P62899 125 aaKnown RBP27.21■■□□□ 1.95
CBX4-203ENST00000494546 ALKBH1Q13686 389 aaKnown RBP27.21■■□□□ 1.95
CBX4-203ENST00000494546 NCR3LG1Q68D85 454 aa27.21■■□□□ 1.95
CBX4-203ENST00000494546 PNKDQ8N490 385 aa27.21■■□□□ 1.95
CBX4-203ENST00000494546 OR4M1Q8NGD0 313 aa27.21■■□□□ 1.95
CBX4-203ENST00000494546 OR10AC1Q8NH08 325 aa27.21■■□□□ 1.95
CBX4-203ENST00000494546 ZNF747Q9BV97 191 aa27.21■■□□□ 1.95
CBX4-203ENST00000494546 ISG20L2Q9H9L3 353 aaKnown RBP27.21■■□□□ 1.95
CBX4-203ENST00000494546 UNKLQ9H9P5 680 aaKnown RBP27.21■■□□□ 1.95
CBX4-203ENST00000494546 HHLA2Q9UM44 414 aa27.21■■□□□ 1.95
CBX4-203ENST00000494546 RBP2P50120 134 aa27.2■■□□□ 1.94
CBX4-203ENST00000494546 ATP1B3P54709 279 aa27.2■■□□□ 1.94
CBX4-203ENST00000494546 RAB40BQ12829 278 aa27.2■■□□□ 1.94
CBX4-203ENST00000494546 ZNF676Q8N7Q3 588 aa27.2■■□□□ 1.94
CBX4-203ENST00000494546 OR13C3Q8NGS6 347 aa27.2■■□□□ 1.94
CBX4-203ENST00000494546 APH1BQ8WW43 257 aa27.2■■□□□ 1.94
CBX4-203ENST00000494546 ERVK13-1Q9NX77 482 aa27.2■■□□□ 1.94
CBX4-203ENST00000494546 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.2■■□□□ 1.94
CBX4-203ENST00000494546 RPL36Q9Y3U8 105 aaKnown RBP27.2■■□□□ 1.94
CBX4-203ENST00000494546 IGKV1-9A0A0C4DH69 117 aa27.19■■□□□ 1.94
CBX4-203ENST00000494546 OR4C45A6NMZ5 311 aa27.19■■□□□ 1.94
CBX4-203ENST00000494546 IGHA1P01876 353 aa27.19■■□□□ 1.94
CBX4-203ENST00000494546 TK1P04183 234 aa27.19■■□□□ 1.94
CBX4-203ENST00000494546 ATF1P18846 271 aa27.19■■□□□ 1.94
CBX4-203ENST00000494546 COL10A1Q03692 680 aa27.19■■□□□ 1.94
CBX4-203ENST00000494546 LDLRAD3Q86YD5 345 aa27.19■■□□□ 1.94
CBX4-203ENST00000494546 EGFL6Q8IUX8 553 aa27.19■■□□□ 1.94
CBX4-203ENST00000494546 SYS1Q8N2H4 156 aa27.19■■□□□ 1.94
CBX4-203ENST00000494546 ASCC1Q8N9N2 400 aaKnown RBP27.19■■□□□ 1.94
CBX4-203ENST00000494546 DNAAF1Q8NEP3 725 aa27.19■■□□□ 1.94
CBX4-203ENST00000494546 OR51A4Q8NGJ6 313 aa27.19■■□□□ 1.94
CBX4-203ENST00000494546 OR52I1Q8NGK6 324 aa27.19■■□□□ 1.94
CBX4-203ENST00000494546 INPP5EQ9NRR6 644 aa27.19■■□□□ 1.94
CBX4-203ENST00000494546 FBP1P09467 338 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms