RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 SPACA5Q96QH8 159 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 YTHDF1Q9BYJ9 559 aaKnown RBP11.27□□□□□ -0.61
COL1A1-208ENST00000494334 NEK6Q9HC98 313 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 HES4Q9HCC6 221 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 SMURF1Q9HCE7 757 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 TAS2R4Q9NYW5 299 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 DUX4Q9UBX2 424 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 CLN8Q9UBY8 286 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 ZFHX3Q15911 3703 aa11.27□□□□□ -0.61
COL1A1-208ENST00000494334 IGKV1D-17A0A075B6S4 117 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 OR2AT4A6NND4 320 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 F8VVB4 439 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 F8VWA3 439 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 DVL1O14640 695 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 SPRY1O43609 319 aaPredicted RBP11.26□□□□□ -0.61
COL1A1-208ENST00000494334 TFF1P04155 84 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 PSG2P11465 335 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 RAB3AP20336 220 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 PCMT1P22061 227 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 POU3F4P49335 361 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 NPY4RP50391 375 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 GABARAPL2P60520 117 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 PAX2Q02962 417 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 PDZK1IP1Q13113 114 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 GPR50Q13585 617 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 ZNF788Q6ZQV5 615 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 SLC36A1Q7Z2H8 476 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 FAM216BQ8N7L0 139 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 SLAMF9Q96A28 289 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 RFT1Q96AA3 541 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 CEP19Q96LK0 163 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 OR14A2Q96R54 314 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 SHARPINQ9H0F6 387 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 DNTTIP1Q9H147 329 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 ZNF222Q9UK12 451 aa11.26□□□□□ -0.61
COL1A1-208ENST00000494334 TRBV5-7A0A0A0MS05 114 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 A0A0G2JMP0 313 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 A0A0X1KG70 313 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 A0A1W2PPK0 400 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 RFPL4AA6NLU0 287 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 ZNF879B4DU55 563 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 RFPL4AL1F8VTS6 287 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 MRPS14O60783 128 aaKnown RBP11.25□□□□□ -0.61
COL1A1-208ENST00000494334 GPX5O75715 221 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 NXPH2O95156 264 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 AVPP01185 164 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 HCKP08631 526 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 HSMCR30P0CW71 290 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 HOXB4P17483 251 aaPredicted RBP11.25□□□□□ -0.61
COL1A1-208ENST00000494334 IGFBP3P17936 291 aaPredicted RBP11.25□□□□□ -0.61
COL1A1-208ENST00000494334 GATA3P23771 443 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 NPBWR2P48146 333 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 EMX1Q04741 257 aaPredicted RBP11.25□□□□□ -0.61
COL1A1-208ENST00000494334 KISS1Q15726 138 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 TBCEQ15813 527 aaPredicted RBP11.25□□□□□ -0.61
COL1A1-208ENST00000494334 SMIM21Q3B7S5 101 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 DCAF12L2Q5VW00 463 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 IL17RELQ6ZVW7 336 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 MKXQ8IYA7 352 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 FGFRL1Q8N441 504 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 OR4M2Q8NGB6 313 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 OR52N4Q8NGI2 321 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 OR5D18Q8NGL1 313 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 UFD1Q92890 307 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 DACT3Q96B18 629 aaPredicted RBP11.25□□□□□ -0.61
COL1A1-208ENST00000494334 GAFA1Q96PS6 74 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 BEX2Q9BXY8 128 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 TMPRSS13Q9BYE2 586 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 ISYNA1Q9NPH2 558 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 OR5V1Q9UGF6 321 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 CDC42EP3Q9UKI2 254 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 MAB21L2Q9Y586 359 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 INSIG2Q9Y5U4 225 aa11.25□□□□□ -0.61
COL1A1-208ENST00000494334 SONP18583 2426 aaKnown RBP11.25□□□□□ -0.61
COL1A1-208ENST00000494334 ARHGAP32A7KAX9 2087 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 LOC105371242A0A075B767 164 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 IGKV1-12A0A0C4DH73 117 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 C22orf46C9J442 243 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 SIGLEC5O15389 551 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 PIN1P1O15428 100 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 MAGEB3O15480 346 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 NDUFB3O43676 98 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 ANGPTL7O43827 346 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 CYB5AP00167 134 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 IGKV1D-12P01611 117 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 ALDOBP05062 364 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 SELLP14151 372 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 BCL3P20749 454 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 TGFBR2P37173 567 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 GABRA2P47869 451 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 ZP1P60852 638 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 MLLT11Q13015 90 aaPredicted RBP11.24□□□□□ -0.61
COL1A1-208ENST00000494334 IKZF1Q13422 519 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 TPBGQ13641 420 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 INSL4Q14641 139 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 DGUOKQ16854 277 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 CHRFAM7AQ494W8 412 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 ACSM3Q53FZ2 586 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 LIPKQ5VXJ0 399 aa11.24□□□□□ -0.61
COL1A1-208ENST00000494334 UNQ9370/PRO34162Q6UXP9 181 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms