RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PRSS37A4D1T9 235 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 OR6C6A6NF89 314 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 F5H5K5 113 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 G3V4G9 280 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 P2RY10O00398 339 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 XKRYO14609 159 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 CDC42EP2O14613 210 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 FFAR1O14842 300 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 ENSAO43768 121 aaKnown RBP4.21□□□□□ -1.74
PTCD3-219ENST00000494323 CLPXO76031 633 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 IGF2P01344 180 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 IGHV1-69P01742 117 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 CD14P08571 375 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 VIMP08670 466 aaKnown RBP4.21□□□□□ -1.74
PTCD3-219ENST00000494323 IRF2P14316 349 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 ZNF26P17031 533 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-219ENST00000494323 CA6P23280 308 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 GPR4P46093 362 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 BPIFB3P59826 476 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 SELENOWP63302 87 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 PRKCDQ05655 676 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 ST3GAL3Q11203 375 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 AQP6Q13520 282 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 CYLC2Q14093 348 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-219ENST00000494323 GK2Q14410 553 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-219ENST00000494323 OR8B8Q15620 311 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 FAM189A2Q15884 450 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 ZBED5Q49AG3 693 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 CYBRD1Q53TN4 286 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 MESTQ5EB52 335 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 CLEC12AQ5QGZ9 265 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 CORO6Q6QEF8 472 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 FBXW12Q6X9E4 464 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 ZNF730Q6ZMV8 503 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 ZNF826PQ6ZT77 177 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 CALHM3Q86XJ0 350 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 C1orf87Q8N0U7 546 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 FGFRL1Q8N441 504 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 TMEM86BQ8N661 226 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 ZSCAN4Q8NAM6 433 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-219ENST00000494323 PAPD5Q8NDF8 572 aaKnown RBP4.21□□□□□ -1.74
PTCD3-219ENST00000494323 OR52I2Q8NH67 350 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 TMED6Q8WW62 240 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 SSMEM1Q8WWF3 244 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 CORO2AQ92828 525 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 APOBEC3DQ96AK3 386 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-219ENST00000494323 SLCO4A1Q96BD0 722 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 RASD2Q96D21 266 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 ZNF479Q96JC4 524 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 ZNF583Q96ND8 569 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 TSSK2Q96PF2 358 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 CITED2Q99967 270 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-219ENST00000494323 FNDC11Q9BVV2 318 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 TRIM15Q9C019 465 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 SYT4Q9H2B2 425 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 SEMA6AQ9H2E6 1030 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 DPAGT1Q9H3H5 408 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 ARGLU1Q9NWB6 273 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-219ENST00000494323 ERVK-18Q9QC07 812 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 CTSZQ9UBR2 303 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 SIGLEC9Q9Y336 463 aa4.21□□□□□ -1.74
PTCD3-219ENST00000494323 TET2Q6N021 2002 aaPredicted RBP4.21□□□□□ -1.74
PTCD3-219ENST00000494323 IGHV3OR15-7A0A075B7D8 119 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 A0A087WUU8 490 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 LOC100653049A0A140TA62 436 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 A0A1W2PPQ1 181 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 ELOVL7A1L3X0 281 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 IQCF6A8MYZ5 107 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 DCTN6O00399 190 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 DVL1O14640 695 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 PHYHO14832 338 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 XRCC3O43542 346 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 OR10H3O60404 316 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 KHDRBS3O75525 346 aaKnown RBP4.2□□□□□ -1.74
PTCD3-219ENST00000494323 FCN3O75636 299 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 KRT34O76011 436 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 IFNA14P01570 189 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 GYPAP02724 150 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 LIPFP07098 398 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 IFNA8P32881 189 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 KDELR2P33947 212 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 THBS3P49746 956 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 RGS6P49758 472 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 DLX1P56177 255 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 LSM6P62312 80 aaKnown RBP4.2□□□□□ -1.74
PTCD3-219ENST00000494323 ELF3P78545 371 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-219ENST00000494323 MZT1Q08AG7 82 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 COX10Q12887 443 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 TRAM2Q15035 370 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 ZNF181Q2M3W8 571 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 LRRC23Q53EV4 343 aaPredicted RBP4.2□□□□□ -1.74
PTCD3-219ENST00000494323 METTL11BQ5VVY1 283 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 SLC35E4Q6ICL7 350 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 PET117Q6UWS5 81 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 BTN2A1Q7KYR7 527 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 MEPCEQ7L2J0 689 aaKnown RBP4.2□□□□□ -1.74
PTCD3-219ENST00000494323 VTCN1Q7Z7D3 282 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 ZNF114Q8NC26 417 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 OR11L1Q8NGX0 322 aa4.2□□□□□ -1.74
PTCD3-219ENST00000494323 SPRYD4Q8WW59 207 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms