RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 NPBWR2P48146 333 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 CCL8P80075 99 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 ELP2Q6IA86 826 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 CNIH2Q6PI25 160 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 WDR82Q6UXN9 313 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 ZNF826PQ6ZT77 177 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 BIVMQ86UB2 503 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 CCDC190Q86UF4 302 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 CDH24Q86UP0 819 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 MOGAT3Q86VF5 341 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 LRRC28Q86X40 367 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-231ENST00000494043 CMTM4Q8IZR5 234 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 POC1AQ8NBT0 407 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 Q8NFD4 153 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 RAB40AQ8WXH6 277 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 ERGIC1Q969X5 290 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 ZNF488Q96MN9 340 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 PSMG3-AS1Q96PY0 264 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 NRIP2Q9BQI9 281 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 EGLN1Q9GZT9 426 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 ABCG5Q9H222 651 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 BANF2Q9H503 90 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 PLEKHF2Q9H8W4 249 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 SAP30LQ9HAJ7 183 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 PCDHB16Q9NRJ7 776 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 DECR2Q9NUI1 292 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 RBFOX1Q9NWB1 397 aaKnown RBP9.64□□□□□ -0.87
MCF2L-231ENST00000494043 C1orf123Q9NWV4 160 aa9.64□□□□□ -0.87
MCF2L-231ENST00000494043 RAI1Q7Z5J4 1906 aaPredicted RBP9.64□□□□□ -0.87
MCF2L-231ENST00000494043 ICE1Q9Y2F5 2266 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 hCG_1807616A0A1W2PRN6 198 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 F8VVB4 439 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 F8VWA3 439 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 TPD52L2O43399 206 aaKnown RBP9.63□□□□□ -0.87
MCF2L-231ENST00000494043 NOS1APO75052 506 aaPredicted RBP9.63□□□□□ -0.87
MCF2L-231ENST00000494043 CSTBP04080 98 aaKnown RBP9.63□□□□□ -0.87
MCF2L-231ENST00000494043 GTF2F2P13984 249 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 TNFRSF1AP19438 455 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 CFHR2P36980 270 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 PMELP40967 661 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 ETV6P41212 452 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 ERVK11-1P61568 191 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 RPS27AP62979 156 aaKnown RBP9.63□□□□□ -0.87
MCF2L-231ENST00000494043 C20orf204Q6ZNR8 217 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 Q8IYB0 196 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 BATF2Q8N1L9 274 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 OSR2Q8N2R0 312 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 OR4M1Q8NGD0 313 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 OR10Z1Q8NGY1 313 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 Q8TCH9 128 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 MRPS24Q96EL2 167 aaKnown RBP9.63□□□□□ -0.87
MCF2L-231ENST00000494043 DIRAS2Q96HU8 199 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 Q96M66 194 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 CACNG6Q9BXT2 260 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 LPAR5Q9H1C0 372 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 RHOFQ9HBH0 211 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 GCM1Q9NP62 436 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 AKIP1Q9NQ31 210 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 EXTL2Q9UBQ6 330 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 LAMP3Q9UQV4 416 aa9.63□□□□□ -0.87
MCF2L-231ENST00000494043 CRYBG3Q68DQ2 2970 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 H7C417 338 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 AKR7A2O43488 359 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 CDK2P24941 298 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 COL8A1P27658 744 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 TALDO1P37837 337 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 RBM11P57052 281 aaKnown RBP9.62□□□□□ -0.87
MCF2L-231ENST00000494043 FGF12P61328 243 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 FAM189A2Q15884 450 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 NHLRC3Q5JS37 347 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 SPANXN2Q5MJ10 180 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 ZNF295-AS1Q8N0V1 137 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 FAM58AQ8N1B3 248 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 MFSD4AQ8N468 514 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 OR11L1Q8NGX0 322 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 LRRC29Q8WV35 223 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 S100ZQ8WXG8 99 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 EMG1Q92979 244 aaKnown RBP9.62□□□□□ -0.87
MCF2L-231ENST00000494043 C14orf79Q96F83 325 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 S100A16Q96FQ6 103 aaKnown RBP9.62□□□□□ -0.87
MCF2L-231ENST00000494043 VRK1Q99986 396 aaPredicted RBP9.62□□□□□ -0.87
MCF2L-231ENST00000494043 GAL3ST1Q99999 423 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 NICN1Q9BSH3 213 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 URM1Q9BTM9 101 aaKnown RBP9.62□□□□□ -0.87
MCF2L-231ENST00000494043 TM2D1Q9BX74 207 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 SELENOIQ9C0D9 397 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 RAB1BQ9H0U4 201 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 ATG5Q9H1Y0 275 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 HES4Q9HCC6 221 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 HMG20AQ9NP66 347 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 PPP1R3CQ9UQK1 317 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 V9GYH0 126 aa9.62□□□□□ -0.87
MCF2L-231ENST00000494043 ARFGEF3Q5TH69 2177 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 A0A0A6YYD4 124 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 A0A0A6YYH2 397 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 METTL21EPA6NDL7 271 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 A6NJ64 397 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 SRRM5B3KS81 715 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 WNT9BO14905 357 aa9.61□□□□□ -0.87
MCF2L-231ENST00000494043 SCGNO76038 276 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms