RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 CDH11P55287 796 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 SCAND1P57086 179 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 PCBP3P57721 371 aaKnown RBP7.09□□□□□ -1.27
HDAC6-234ENST00000493923 EFNB1P98172 346 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 POU4F2Q12837 409 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 P2RY6Q15077 328 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 RHEBQ15382 184 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 ENTPD8Q5MY95 495 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 C9orf135Q5VTT2 229 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF322Q6U7Q0 402 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-234ENST00000493923 LINGO2Q7L985 606 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 ZIC4Q8N9L1 334 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 WDR31Q8NA23 367 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 OR56B1Q8NGI3 324 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF563Q8TA94 476 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 MEGF10Q96KG7 1140 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF426Q9BUY5 554 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF471Q9BX82 626 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-234ENST00000493923 POTEKPQ9BYX7 375 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 CHST5Q9GZS9 411 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 SYT4Q9H2B2 425 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 TMEM27Q9HBJ8 222 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 GP6Q9HCN6 339 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 H2AFY2Q9P0M6 372 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-234ENST00000493923 CHRNA9Q9UGM1 479 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 TNFSF18Q9UNG2 199 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 SLC35A3Q9Y2D2 325 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 TMED7Q9Y3B3 224 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 ETV7Q9Y603 341 aa7.09□□□□□ -1.27
HDAC6-234ENST00000493923 A0A096LNT2 108 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 UNC119BA6NIH7 251 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 FRS3O43559 492 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 IGF2P01344 180 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 CD1AP06126 327 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 GUSBP08236 651 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 METTL15P1P0C7V9 234 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 NQO2P16083 231 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 TACR3P29371 465 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 HTR1FP30939 366 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 APOBEC1P41238 236 aaKnown RBP7.08□□□□□ -1.28
HDAC6-234ENST00000493923 ACAA2P42765 397 aaKnown RBP7.08□□□□□ -1.28
HDAC6-234ENST00000493923 SMCPP49901 116 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-234ENST00000493923 LUMP51884 338 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-234ENST00000493923 RGS8P57771 180 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-234ENST00000493923 RPS4XP62701 263 aaKnown RBP7.08□□□□□ -1.28
HDAC6-234ENST00000493923 RAP1AP62834 184 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 H3F3AP84243 136 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 CLEC12BQ2HXU8 276 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 MRPL2Q5T653 305 aaKnown RBP7.08□□□□□ -1.28
HDAC6-234ENST00000493923 SFRP4Q6FHJ7 346 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-234ENST00000493923 OR52W1Q6IF63 320 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 C11orf71Q6IPW1 123 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 REEP3Q6NUK4 255 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 ZNF836Q6ZNA1 936 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 DNM1P46Q6ZS02 220 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 SLC36A1Q7Z2H8 476 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 GRINAQ7Z429 371 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 ZNF100Q8IYN0 542 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 TMEM99Q8N816 258 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 ZNF511Q8NB15 262 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 INO80EQ8NBZ0 244 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-234ENST00000493923 SLC30A7Q8NEW0 376 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 OR13D1Q8NGV5 346 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 OR6N1Q8NGY5 312 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 OR52N5Q8NH56 324 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 NFKBIDQ8NI38 313 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 ZNF671Q8TAW3 534 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 SNX33Q8WV41 574 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 NUDCD2Q8WVJ2 157 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 SPRYD4Q8WW59 207 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-234ENST00000493923 TEAD3Q99594 435 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 NDUFAF3Q9BU61 184 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 TLNRD1Q9H1K6 362 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 SLCO5A1Q9H2Y9 848 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 SLC7A10Q9NS82 523 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-234ENST00000493923 FLVCR1Q9Y5Y0 555 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 SLC25A15Q9Y619 301 aa7.08□□□□□ -1.28
HDAC6-234ENST00000493923 A0A0G2JK05 382 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 TMEM238LA0A1B0GVL6 79 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 CDHR4A6H8M9 788 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 OR5H1A6NKK0 313 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 F8VVB4 439 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 F8VWA3 439 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 PLPP2O43688 288 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 GPRIN2O60269 458 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 ANXA2P07355 339 aaKnown RBP7.07□□□□□ -1.28
HDAC6-234ENST00000493923 HCKP08631 526 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 DAOP14920 347 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 FGF7P21781 194 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 CPT2P23786 658 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 HTR2CP28335 458 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 AQP1P29972 269 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 ATP6V1E1P36543 226 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 CAV2P51636 162 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 SLC16A1P53985 500 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 GLO1Q04760 184 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 SLC17A1Q14916 467 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 RSU1Q15404 277 aa7.07□□□□□ -1.28
HDAC6-234ENST00000493923 USF2Q15853 346 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms