RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 ALDOBP05062 364 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 VSIG8P0DPA2 414 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 OR12D2P58182 307 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 CD83Q01151 205 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 SPATS1Q496A3 300 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 DEFB121Q5J5C9 76 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 ZNF626Q68DY1 528 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 LCN8Q6JVE9 175 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 ZNF573Q86YE8 665 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 CPOQ8IVL8 374 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 ASCC1Q8N9N2 400 aaKnown RBP9.91□□□□□ -0.82
SAMM50-205ENST00000493621 BBS1Q8NFJ9 593 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 OR5AU1Q8NGC0 362 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 OR11H6Q8NGC7 330 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 GIPC3Q8TF64 312 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 NRIP2Q9BQI9 281 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 MUC13Q9H3R2 512 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 GPR173Q9NS66 373 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 POLDIP2Q9Y2S7 368 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 HILPDAQ9Y5L2 63 aa9.91□□□□□ -0.82
SAMM50-205ENST00000493621 K7N7A8 449 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 SNX3O60493 162 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 IGLV3-1P01715 115 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 PF4P02776 101 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 ZNF728P0DKX0 622 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 IGHV1-8P0DP01 117 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 EDDM3BP56851 147 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 SLC35A2P78381 396 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 COL10A1Q03692 680 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 SLC34A1Q06495 639 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 FAM98BQ52LJ0 330 aaKnown RBP9.9□□□□□ -0.82
SAMM50-205ENST00000493621 SLC35D3Q5M8T2 416 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 KCTD18Q6PI47 426 aaPredicted RBP9.9□□□□□ -0.82
SAMM50-205ENST00000493621 CCDC121Q6ZUS5 278 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 ASRGL1Q7L266 308 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 ITFG2Q969R8 447 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 OCSTAMPQ9BR26 566 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 MROQ9BYG7 248 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 TTTY10Q9BZA0 68 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 YIPF3Q9GZM5 350 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 HES4Q9HCC6 221 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 BATF3Q9NR55 127 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 NDE1Q9NXR1 346 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 SLC22A13Q9Y226 551 aa9.9□□□□□ -0.82
SAMM50-205ENST00000493621 RYR3Q15413 4870 aa9.9□□□□□ -0.83
SAMM50-205ENST00000493621 WI2-2373I1.2A0A1W2PRP0 233 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 TCRBV4S1A1TA0A5B7 111 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 PQLC2LA1A4F0 135 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 PRR32B1ATL7 298 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 DHRS3O75911 302 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 RBP4P02753 201 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 HMGN1P05114 100 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 MRPL3P09001 348 aaKnown RBP9.89□□□□□ -0.83
SAMM50-205ENST00000493621 SLC2A5P22732 501 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 DYNLT3P51808 116 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 KRTAP10-11P60412 298 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 ESRRGP62508 458 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 MFGE8Q08431 387 aaPredicted RBP9.89□□□□□ -0.83
SAMM50-205ENST00000493621 APOFQ13790 326 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 CLVS2Q5SYC1 327 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 DEGS2Q6QHC5 323 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 GDPD3Q7L5L3 318 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 CENPVQ7Z7K6 275 aaPredicted RBP9.89□□□□□ -0.83
SAMM50-205ENST00000493621 DHFR2Q86XF0 187 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 NDNFQ8TB73 568 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 BCAS4Q8TDM0 211 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 NUFIP1Q9UHK0 495 aaKnown RBP9.89□□□□□ -0.83
SAMM50-205ENST00000493621 GTF2A1LQ9UNN4 478 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 DNAH9Q9NYC9 4486 aa9.89□□□□□ -0.83
SAMM50-205ENST00000493621 A6NIN4 97 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 ZNF254O75437 659 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 TTRP02766 147 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 AZGP1P25311 298 aaKnown RBP9.88□□□□□ -0.83
SAMM50-205ENST00000493621 RIDAP52758 137 aaKnown RBP9.88□□□□□ -0.83
SAMM50-205ENST00000493621 ERVK11-1P61568 191 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 ACTA2P62736 377 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 ACTG2P63267 376 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 ACTC1P68032 377 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 ACTA1P68133 377 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 CDK5Q00535 292 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 ZNF829Q3KNS6 432 aaPredicted RBP9.88□□□□□ -0.83
SAMM50-205ENST00000493621 TCTEX1D4Q5JR98 221 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 MINOS1Q5TGZ0 78 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 LCN1P1Q5VSP4 162 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 TMEM42Q69YG0 159 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 TCF23Q7RTU1 214 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 TMEM179BQ7Z7N9 219 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 ANGPTL5Q86XS5 388 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 ZNF679Q8IYX0 411 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 RCC1LQ96I51 464 aaKnown RBP9.88□□□□□ -0.83
SAMM50-205ENST00000493621 ZNF714Q96N38 554 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 IKZF2Q9UKS7 526 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 COPS3Q9UNS2 423 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 TSSC4Q9Y5U2 329 aaPredicted RBP9.88□□□□□ -0.83
SAMM50-205ENST00000493621 MINOS1-NBL1R4GNA1 71 aa9.88□□□□□ -0.83
SAMM50-205ENST00000493621 IGHV2-26A0A0B4J1V2 119 aa9.87□□□□□ -0.83
SAMM50-205ENST00000493621 ARRDC5A6NEK1 342 aa9.87□□□□□ -0.83
SAMM50-205ENST00000493621 FAM90A22PA8MWA6 464 aa9.87□□□□□ -0.83
SAMM50-205ENST00000493621 H3BUI4 141 aa9.87□□□□□ -0.83
SAMM50-205ENST00000493621 DLGAP1O14490 977 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms