RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 GPX2P18283 190 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 MAPK3P27361 379 aaPredicted RBP2.32□□□□□ -2.04
PTCD3-218ENST00000493430 LAP3P28838 519 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 GTF2E2P29084 291 aaKnown RBP2.32□□□□□ -2.04
PTCD3-218ENST00000493430 PYCR1P32322 319 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 GSSP48637 474 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 CSNK1A1P48729 337 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 NUDT2P50583 147 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 TAS2R41P59536 307 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 UBE2NP61088 152 aaKnown RBP2.32□□□□□ -2.04
PTCD3-218ENST00000493430 VLDLRP98155 873 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 NDPQ00604 133 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 LIPEQ05469 1076 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 CD47Q08722 323 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 ZP4Q12836 540 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 PMS2P3Q13401 168 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 C1DQ13901 141 aaKnown RBP2.32□□□□□ -2.04
PTCD3-218ENST00000493430 ENDOGQ14249 297 aaKnown RBP2.32□□□□□ -2.04
PTCD3-218ENST00000493430 SGCAQ16586 387 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 TRMT5Q32P41 509 aaKnown RBP2.32□□□□□ -2.04
PTCD3-218ENST00000493430 MESTQ5EB52 335 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 PABPC1L2AQ5JQF8 200 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 FAM120AOSQ5T036 256 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 SHEQ5VZ18 495 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 FAM91A1Q658Y4 838 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 NANOGP8Q6NSW7 305 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 REEP3Q6NUK4 255 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 DHRS4L2Q6PKH6 230 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 SLC35D2Q76EJ3 337 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 NANOGNBQ7Z5D8 188 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 NET1Q7Z628 596 aaPredicted RBP2.32□□□□□ -2.04
PTCD3-218ENST00000493430 NAA40Q86UY6 237 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 NRMQ8IXM6 262 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 C20orf196Q8IYI0 205 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 LRRC75A-AS1Q8N1F1 130 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 SLC43A2Q8N370 569 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 GPR137CQ8N3F9 429 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 LRRC75AQ8NAA5 344 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 BHLHE23Q8NDY6 225 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 OR10AD1Q8NGE0 317 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 OR9Q2Q8NGE9 314 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 OR51L1Q8NGJ5 315 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 OR8D4Q8NGM9 314 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 OR6N1Q8NGY5 312 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 OR52J3Q8NH60 311 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 CLDND2Q8NHS1 167 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF420Q8TAQ5 688 aaPredicted RBP2.32□□□□□ -2.04
PTCD3-218ENST00000493430 SLC25A40Q8TBP6 338 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 SLC38A4Q969I6 547 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 TMEM54Q969K7 222 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 MCHR2Q969V1 340 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 NABP1Q96AH0 204 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 TMEM45BQ96B21 275 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 LRRC58Q96CX6 371 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 MUCL1Q96DR8 90 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 RBMXL1Q96E39 390 aaKnown RBP2.32□□□□□ -2.04
PTCD3-218ENST00000493430 SEH1LQ96EE3 360 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 ZHX1-C8orf76Q96EF9 292 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 SLC41A3Q96GZ6 507 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 OXGR1Q96P68 337 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 TNFRSF13CQ96RJ3 184 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 INTS14Q96SY0 518 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 CCDC28BQ9BUN5 200 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 C19orf24Q9BVV8 132 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 TAPBPLQ9BX59 468 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 KAT8Q9H7Z6 458 aaKnown RBP2.32□□□□□ -2.04
PTCD3-218ENST00000493430 RMND5AQ9H871 391 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 NANOGQ9H9S0 305 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 BCL2L10Q9HD36 194 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 DYNLRB1Q9NP97 96 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF275Q9NSD4 429 aaPredicted RBP2.32□□□□□ -2.04
PTCD3-218ENST00000493430 TMEM38BQ9NVV0 291 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 B3GNT2Q9NY97 397 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 EMC3Q9P0I2 261 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 NDUFAF1Q9Y375 327 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 HDGFL3Q9Y3E1 203 aa2.32□□□□□ -2.04
PTCD3-218ENST00000493430 SVEP1Q4LDE5 3571 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 IGHV3OR15-7A0A075B7D8 119 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 A0A087WUU8 490 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 TRAPPC13A5PLN9 417 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 TVP23AA6NH52 213 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF99A8MXY4 864 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-218ENST00000493430 FAM220BPB1ANY3 271 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 FAAHO00519 579 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 CXCR6O00574 342 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF208O43345 1280 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 CHP2O43745 196 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 RP2O75695 350 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 OR7A10O76100 309 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 STAMBPO95630 424 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 CYB5R3P00387 301 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-218ENST00000493430 TGFAP01135 160 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 HLA-DPB1P04440 258 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 MMP7P09237 267 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-218ENST00000493430 ASAH2BP0C7U1 165 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 SLC2A1P11166 492 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 COX4I1P13073 169 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF35P13682 527 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 IRF2P14316 349 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 CTLA4P16410 223 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms