RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 TMEM200BQ69YZ2 307 aa10.16□□□□□ -0.78
COL6A1-205ENST00000492851 Q6ZTK2 550 aa10.16□□□□□ -0.78
COL6A1-205ENST00000492851 CD177Q8N6Q3 437 aa10.16□□□□□ -0.78
COL6A1-205ENST00000492851 YIPF7Q8N8F6 280 aa10.16□□□□□ -0.78
COL6A1-205ENST00000492851 OR4C13Q8NGP0 309 aa10.16□□□□□ -0.78
COL6A1-205ENST00000492851 PPP1R14AQ96A00 147 aa10.16□□□□□ -0.78
COL6A1-205ENST00000492851 CDCA4Q9BXL8 241 aa10.16□□□□□ -0.78
COL6A1-205ENST00000492851 CADM1Q9BY67 442 aaKnown RBP10.16□□□□□ -0.78
COL6A1-205ENST00000492851 GABARAPL1Q9H0R8 117 aa10.16□□□□□ -0.78
COL6A1-205ENST00000492851 RANBP3Q9H6Z4 567 aaPredicted RBP10.16□□□□□ -0.78
COL6A1-205ENST00000492851 HES4Q9HCC6 221 aa10.16□□□□□ -0.78
COL6A1-205ENST00000492851 GPR173Q9NS66 373 aa10.16□□□□□ -0.78
COL6A1-205ENST00000492851 C19orf12Q9NSK7 152 aa10.16□□□□□ -0.78
COL6A1-205ENST00000492851 MRM2Q9UI43 246 aaKnown RBP10.16□□□□□ -0.78
COL6A1-205ENST00000492851 SLC22A13Q9Y226 551 aa10.16□□□□□ -0.78
COL6A1-205ENST00000492851 TRRAPQ9Y4A5 3859 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 A0A1B0GTI1 187 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 METTL15A6NJ78 407 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 PRR32B1ATL7 298 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 K7N7A8 449 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 SYT7O43581 403 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 SYNGR1O43759 233 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 RBP4P02753 201 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 TFF1P04155 84 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 HTR1FP30939 366 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 KRTAP10-3P60369 221 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 PRB3Q04118 309 aaPredicted RBP10.15□□□□□ -0.78
COL6A1-205ENST00000492851 BNIP1Q12981 228 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 HCP5Q6MZN7 132 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 PLEKHG7Q6ZR37 379 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 MKXQ8IYA7 352 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 Q8IYB0 196 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 ENTHD1Q8IYW4 607 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 PNKDQ8N490 385 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 OR8J1Q8NGP2 316 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 OR13D1Q8NGV5 346 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 OR2T6Q8NHC8 308 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 TRUB1Q8WWH5 349 aaKnown RBP10.15□□□□□ -0.78
COL6A1-205ENST00000492851 IL4I1Q96RQ9 567 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 MYCBPQ99417 103 aaPredicted RBP10.15□□□□□ -0.78
COL6A1-205ENST00000492851 TTTY10Q9BZA0 68 aa10.15□□□□□ -0.78
COL6A1-205ENST00000492851 SEBOXQ9HB31 216 aaPredicted RBP10.15□□□□□ -0.78
COL6A1-205ENST00000492851 ELL3Q9HB65 397 aaPredicted RBP10.15□□□□□ -0.78
COL6A1-205ENST00000492851 RPP14O95059 124 aaKnown RBP10.14□□□□□ -0.79
COL6A1-205ENST00000492851 CYB5AP00167 134 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 CSF1P09603 554 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 DLX1P56177 255 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 ERVK11-1P61568 191 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 MEF2CQ06413 473 aaPredicted RBP10.14□□□□□ -0.79
COL6A1-205ENST00000492851 HERPUD1Q15011 391 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 DMRTC1Q5HYR2 192 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 GDPD3Q7L5L3 318 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 FAM220AQ7Z4H9 259 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 BCDIN3DQ7Z5W3 292 aaKnown RBP10.14□□□□□ -0.79
COL6A1-205ENST00000492851 KCTD20Q7Z5Y7 419 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 C11orf42Q8N5U0 333 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 PP6455Q8WZ26 134 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 MALSU1Q96EH3 234 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 CEP19Q96LK0 163 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 ZNF488Q96MN9 340 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 NPFFR1Q9GZQ6 430 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 OR14J1Q9UGF5 321 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 GLS2Q9UI32 602 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 PITPNC1Q9UKF7 332 aa10.14□□□□□ -0.79
COL6A1-205ENST00000492851 TBL2Q9Y4P3 447 aaKnown RBP10.14□□□□□ -0.79
COL6A1-205ENST00000492851 FAM230AA0A1W2PPH8 454 aa10.13□□□□□ -0.79
COL6A1-205ENST00000492851 A0A1W2PQL4 384 aaPredicted RBP10.13□□□□□ -0.79
COL6A1-205ENST00000492851 C17orf98A8MV24 154 aa10.13□□□□□ -0.79
COL6A1-205ENST00000492851 VGLL3A8MV65 326 aa10.13□□□□□ -0.79
COL6A1-205ENST00000492851 MITFO75030 526 aaPredicted RBP10.13□□□□□ -0.79
COL6A1-205ENST00000492851 RPSAP08865 295 aaKnown RBP10.13□□□□□ -0.79
COL6A1-205ENST00000492851 UBCP0CG48 685 aaKnown RBP10.13□□□□□ -0.79
COL6A1-205ENST00000492851 CDC42P60953 191 aa10.13□□□□□ -0.79
COL6A1-205ENST00000492851 CNN3Q15417 329 aaKnown RBP10.13□□□□□ -0.79
COL6A1-205ENST00000492851 C1orf146Q5VVC0 180 aa10.13□□□□□ -0.79
COL6A1-205ENST00000492851 CATSPERDQ86XM0 798 aa10.13□□□□□ -0.79
COL6A1-205ENST00000492851 ANGPTL5Q86XS5 388 aa10.13□□□□□ -0.79
COL6A1-205ENST00000492851 DNAAF1Q8NEP3 725 aa10.13□□□□□ -0.79
COL6A1-205ENST00000492851 OR10H4Q8NGA5 316 aa10.13□□□□□ -0.79
COL6A1-205ENST00000492851 OR4M1Q8NGD0 313 aa10.13□□□□□ -0.79
COL6A1-205ENST00000492851 FOXRED1Q96CU9 486 aaPredicted RBP10.13□□□□□ -0.79
COL6A1-205ENST00000492851 BORCS8Q96FH0 119 aa10.13□□□□□ -0.79
COL6A1-205ENST00000492851 CENPNQ96H22 339 aaPredicted RBP10.13□□□□□ -0.79
COL6A1-205ENST00000492851 ABCB10Q9NRK6 738 aa10.13□□□□□ -0.79
COL6A1-205ENST00000492851 hADV38S2A0JD32 116 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 A6NIN4 97 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 FAM90A8PA6NJQ4 464 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 SNTNA6NMZ2 147 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 MAGEB4O15481 346 aaPredicted RBP10.12□□□□□ -0.79
COL6A1-205ENST00000492851 ZNF728P0DKX0 622 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 EPHA2P29317 976 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 RBP2P50120 134 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 ATP1B3P54709 279 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 COL10A1Q03692 680 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 LY6EQ16553 131 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 TMEM244Q5VVB8 128 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 ZBTB49Q6ZSB9 765 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 EGFL6Q8IUX8 553 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 OR8H2Q8N162 312 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 ASCC1Q8N9N2 400 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms