RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 ATP6V1G2O95670 118 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 DBTP11182 482 aaKnown RBP16.21■□□□□ 0.19
NELFE-212ENST00000492539 NDUFB7P17568 137 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 KIR2DS4P43632 304 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 RIDAP52758 137 aaKnown RBP16.21■□□□□ 0.19
NELFE-212ENST00000492539 ACTC1P68032 377 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 ACTA1P68133 377 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 BLMHQ13867 455 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 KPRPQ5T749 579 aaPredicted RBP16.21■□□□□ 0.19
NELFE-212ENST00000492539 C11orf88Q6PI97 169 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 CRIP3Q6Q6R5 217 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 Q6ZTK2 550 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 SSX6Q7RTT6 188 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 ZDHHC23Q8IYP9 409 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 C17orf50Q8WW18 174 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 PIGCQ92535 297 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 TBX5Q99593 518 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 SSX3Q99909 188 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 VCX3BQ9H321 246 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 ELL3Q9HB65 397 aaPredicted RBP16.21■□□□□ 0.19
NELFE-212ENST00000492539 ZNF222Q9UK12 451 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 EXOGQ9Y2C4 368 aaKnown RBP16.21■□□□□ 0.19
NELFE-212ENST00000492539 SIGLEC9Q9Y336 463 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 SF3B6Q9Y3B4 125 aaKnown RBP16.21■□□□□ 0.19
NELFE-212ENST00000492539 HSPE1-MOB4S4R3N1 261 aa16.21■□□□□ 0.19
NELFE-212ENST00000492539 IGKV1D-17A0A075B6S4 117 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 TRBV23-1A0A0A0MS06 115 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 ACOD1A6NK06 481 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 G3V4G9 280 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 WBP4O75554 376 aaKnown RBP16.2■□□□□ 0.18
NELFE-212ENST00000492539 RHBDL1O75783 438 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 OPN1MWP04001 364 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 OPN1MW2P0DN77 364 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 OPN1MW3P0DN78 364 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 GLRA1P23415 457 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 ISL1P61371 349 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 ZNF829Q3KNS6 432 aaPredicted RBP16.2■□□□□ 0.18
NELFE-212ENST00000492539 SAMD5Q5TGI4 173 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 KCTD8Q6ZWB6 473 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 OR8B12Q8NGG6 310 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 OR5D13Q8NGL4 314 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 CFHR4Q92496 578 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 TFAP2CQ92754 450 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 LGALS12Q96DT0 336 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 MEGF9Q9H1U4 602 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 FAM206AQ9NX38 181 aa16.2■□□□□ 0.18
NELFE-212ENST00000492539 MRM2Q9UI43 246 aaKnown RBP16.2■□□□□ 0.18
NELFE-212ENST00000492539 RPL36Q9Y3U8 105 aaKnown RBP16.2■□□□□ 0.18
NELFE-212ENST00000492539 TMEM269A0A1B0GVZ9 245 aa16.19■□□□□ 0.18
NELFE-212ENST00000492539 KRT8P05787 483 aa16.19■□□□□ 0.18
NELFE-212ENST00000492539 PSG2P11465 335 aa16.19■□□□□ 0.18
NELFE-212ENST00000492539 ZNF85Q03923 595 aa16.19■□□□□ 0.18
NELFE-212ENST00000492539 AANATQ16613 207 aa16.19■□□□□ 0.18
NELFE-212ENST00000492539 FBLN7Q53RD9 439 aa16.19■□□□□ 0.18
NELFE-212ENST00000492539 ZNF684Q5T5D7 378 aa16.19■□□□□ 0.18
NELFE-212ENST00000492539 C8orf59Q8N0T1 100 aaPredicted RBP16.19■□□□□ 0.18
NELFE-212ENST00000492539 ZNRF1Q8ND25 227 aa16.19■□□□□ 0.18
NELFE-212ENST00000492539 FAM234AQ9H0X4 552 aa16.19■□□□□ 0.18
NELFE-212ENST00000492539 RANBP3Q9H6Z4 567 aaPredicted RBP16.19■□□□□ 0.18
NELFE-212ENST00000492539 MRPS18AQ9NVS2 196 aaKnown RBP16.19■□□□□ 0.18
NELFE-212ENST00000492539 MEGF11A6BM72 1044 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 MAGEB4O15481 346 aaPredicted RBP16.18■□□□□ 0.18
NELFE-212ENST00000492539 SRSF10O75494 262 aaKnown RBP16.18■□□□□ 0.18
NELFE-212ENST00000492539 SULT1C4O75897 302 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 GNAO1P09471 354 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 GABRA2P47869 451 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 GPM6AP51674 278 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 AQP4P55087 323 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 RAB40BQ12829 278 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 LY6EQ16553 131 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 LRRC75BQ2VPJ9 315 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 OR4C13Q8NGP0 309 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 CNIH3Q8TBE1 160 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 RORBQ92753 470 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 SDSLQ96GA7 329 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 OR51I2Q9H344 312 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 MOB1AQ9H8S9 216 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 AMBNQ9NP70 447 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 FOXJ3Q9UPW0 622 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 RRP15Q9Y3B9 282 aaKnown RBP16.18■□□□□ 0.18
NELFE-212ENST00000492539 R4GMQ9 66 aa16.18■□□□□ 0.18
NELFE-212ENST00000492539 METTL15A6NJ78 407 aa16.17■□□□□ 0.18
NELFE-212ENST00000492539 FADS2O95864 444 aaKnown RBP16.17■□□□□ 0.18
NELFE-212ENST00000492539 GNG3P63215 75 aa16.17■□□□□ 0.18
NELFE-212ENST00000492539 MFGE8Q08431 387 aaPredicted RBP16.17■□□□□ 0.18
NELFE-212ENST00000492539 SMN1Q16637 294 aaKnown RBP16.17■□□□□ 0.18
NELFE-212ENST00000492539 HIST2H2BDQ6DRA6 164 aa16.17■□□□□ 0.18
NELFE-212ENST00000492539 PLEKHG7Q6ZR37 379 aa16.17■□□□□ 0.18
NELFE-212ENST00000492539 ACBD7Q8N6N7 88 aa16.17■□□□□ 0.18
NELFE-212ENST00000492539 KLHDC1Q8N7A1 406 aa16.17■□□□□ 0.18
NELFE-212ENST00000492539 TMEM185AQ8NFB2 350 aa16.17■□□□□ 0.18
NELFE-212ENST00000492539 HIST1H2AAQ96QV6 131 aa16.17■□□□□ 0.18
NELFE-212ENST00000492539 RAB18Q9NP72 206 aa16.17■□□□□ 0.18
NELFE-212ENST00000492539 NUFIP1Q9UHK0 495 aaKnown RBP16.17■□□□□ 0.18
NELFE-212ENST00000492539 DAPL1A0PJW8 107 aa16.16■□□□□ 0.18
NELFE-212ENST00000492539 ZNF732B4DXR9 585 aa16.16■□□□□ 0.18
NELFE-212ENST00000492539 ANGPTL7O43827 346 aa16.16■□□□□ 0.18
NELFE-212ENST00000492539 IGHA1P01876 353 aa16.16■□□□□ 0.18
NELFE-212ENST00000492539 CEACAM21Q3KPI0 293 aa16.16■□□□□ 0.18
NELFE-212ENST00000492539 KLHL22Q53GT1 634 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms