RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 TNFRSF11BO00300 401 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 ZNF737O75373 536 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 RBP4P02753 201 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 ZNF728P0DKX0 622 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 HSD17B1P14061 328 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 MAP2K3P46734 347 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 HCCSP53701 268 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 ERVK11-1P61568 191 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 SLC34A1Q06495 639 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 C18orf65Q6ZTR6 163 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 AQP11Q8NBQ7 271 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 THEM6Q8WUY1 208 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 MCUR1Q96AQ8 359 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 MYLK2Q9H1R3 596 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 NIPAL2Q9H841 368 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 OR14J1Q9UGF5 321 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 BAIAP2Q9UQB8 552 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 LRRC42Q9Y546 428 aa10.53□□□□□ -0.72
USF1-206ENST00000491629 A0A0U1RQV5 110 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 OR5B21A6NL26 309 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 RIIAD1A6NNX1 92 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 E9PQ18 207 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 F8VVB4 439 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 F8VWA3 439 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 J3QT63 122 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 MMP23AO75900 390 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 KRT36O76013 467 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 ALDOBP05062 364 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 LPLP06858 475 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 CHRM2P08172 466 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 HAAOP46952 286 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 SAMD4BQ5PRF9 694 aaKnown RBP10.52□□□□□ -0.73
USF1-206ENST00000491629 PLCXD3Q63HM9 321 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 BAIAP2L2Q6UXY1 529 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 RNF144BQ7Z419 303 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.52□□□□□ -0.73
USF1-206ENST00000491629 OR51E1Q8TCB6 317 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 NSMCE2Q96MF7 247 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 TEAD3Q99594 435 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 NIPSNAP1Q9BPW8 284 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 DGCR6LQ9BY27 220 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 YIPF3Q9GZM5 350 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 OR51V1Q9H2C8 321 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 MAGEL2Q9UJ55 1249 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 U3KQK5 164 aa10.52□□□□□ -0.73
USF1-206ENST00000491629 STARD9Q9P2P6 4700 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 IGHV2-26A0A0B4J1V2 119 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 TMEM82A0PJX8 343 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 PQLC2LA1A4F0 135 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 PSMD9O00233 223 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 CCNB2O95067 398 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 NXPH2O95156 264 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 IFNGP01579 166 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 ZNF3P17036 446 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 AZGP1P25311 298 aaKnown RBP10.51□□□□□ -0.73
USF1-206ENST00000491629 MAGEA2P43356 314 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 OR12D2P58182 307 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 ACTA2P62736 377 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 ACTG2P63267 376 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 ACTC1P68032 377 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 ACTA1P68133 377 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 ABCA11PQ4W5N1 156 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 MINOS1Q5TGZ0 78 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 TMEM42Q69YG0 159 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 CCDC197Q8NCU1 140 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 BBS1Q8NFJ9 593 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 OR4P4Q8NGL7 312 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 OTULINQ96BN8 352 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 FAM192AQ9GZU8 254 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 GPR84Q9NQS5 396 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 PIGLQ9Y2B2 252 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 LSM4Q9Y4Z0 139 aaKnown RBP10.51□□□□□ -0.73
USF1-206ENST00000491629 MINOS1-NBL1R4GNA1 71 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 SORL1Q92673 2214 aa10.51□□□□□ -0.73
USF1-206ENST00000491629 CCDC22O60826 627 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 GMNNO75496 209 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 NRASP01111 189 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 ALOX5APP20292 161 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 MPZP25189 248 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 THBS3P49746 956 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 RIPPLY1Q0D2K3 151 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 MICAQ29983 383 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 ANGPTL5Q86XS5 388 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 TPRX1Q8N7U7 411 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 ZNF454Q8N9F8 522 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 ASCC1Q8N9N2 400 aaKnown RBP10.5□□□□□ -0.73
USF1-206ENST00000491629 CHID1Q9BWS9 393 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 PBOV1Q9GZY1 135 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 CCDC134Q9H6E4 229 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 LIN7BQ9HAP6 207 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 GPR173Q9NS66 373 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 GAR1Q9NY12 217 aaKnown RBP10.5□□□□□ -0.73
USF1-206ENST00000491629 U3KQV3 271 aa10.5□□□□□ -0.73
USF1-206ENST00000491629 A6NIN4 97 aa10.49□□□□□ -0.73
USF1-206ENST00000491629 ATP6V1B2P21281 511 aa10.49□□□□□ -0.73
USF1-206ENST00000491629 SLC2A5P22732 501 aa10.49□□□□□ -0.73
USF1-206ENST00000491629 EDDM3BP56851 147 aa10.49□□□□□ -0.73
USF1-206ENST00000491629 MFGE8Q08431 387 aaPredicted RBP10.49□□□□□ -0.73
USF1-206ENST00000491629 KHDC1LQ5JSQ8 128 aa10.49□□□□□ -0.73
USF1-206ENST00000491629 PLBD1Q6P4A8 553 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms