RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 TREM2Q9NZC2 230 aa8.67□□□□□ -1.02
ERCC3-208ENST00000491292 TPRP12270 2363 aaKnown RBP8.67□□□□□ -1.02
ERCC3-208ENST00000491292 FIGNL2A6NMB9 653 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 OR2J2O76002 312 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 RBP2P50120 134 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 RPS23P62266 143 aaKnown RBP8.66□□□□□ -1.02
ERCC3-208ENST00000491292 FOXF1Q12946 379 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 TEX30Q5JUR7 227 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 BEND4Q6ZU67 534 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 C1orf87Q8N0U7 546 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 GPR137CQ8N3F9 429 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 SP7Q8TDD2 431 aaPredicted RBP8.66□□□□□ -1.02
ERCC3-208ENST00000491292 IL1F10Q8WWZ1 152 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 PIGCQ92535 297 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 ELSPBP1Q96BH3 223 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 TVP23CQ96ET8 276 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 SGCZQ96LD1 299 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 LAMP3Q9UQV4 416 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 CCDC187A0A096LP49 1063 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 NPIPB9F8W1W9 429 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 HSD17B6O14756 317 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 PGA4P0DJD7 388 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 PGA5P0DJD9 388 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 CSNK1EP49674 416 aaKnown RBP8.66□□□□□ -1.02
ERCC3-208ENST00000491292 CCL20P78556 96 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.66□□□□□ -1.02
ERCC3-208ENST00000491292 MPV17LQ2QL34 196 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 OR52M1Q8NGK5 317 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 OR51H1Q8NH63 302 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 PTPMT1Q8WUK0 201 aaPredicted RBP8.66□□□□□ -1.02
ERCC3-208ENST00000491292 MRGPRFQ96AM1 343 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 SCARF2Q96GP6 870 aaPredicted RBP8.66□□□□□ -1.02
ERCC3-208ENST00000491292 SMOC1Q9H4F8 434 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 DHRS7CA6NNS2 312 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 SEC14L6B5MCN3 397 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 TNFSF14O43557 240 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 CD5P06127 495 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 HEXAP06865 529 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 DDTP30046 118 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 CDX1P47902 265 aaPredicted RBP8.66□□□□□ -1.02
ERCC3-208ENST00000491292 BLKP51451 505 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 RPS16P62249 146 aaKnown RBP8.66□□□□□ -1.02
ERCC3-208ENST00000491292 SUPT4H1P63272 117 aaKnown RBP8.66□□□□□ -1.02
ERCC3-208ENST00000491292 DCDP81605 110 aaKnown RBP8.66□□□□□ -1.02
ERCC3-208ENST00000491292 ROM1Q03395 351 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 DMWDQ09019 674 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 MFAP5Q13361 173 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 LILRB2Q8N423 598 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 PECRQ9BY49 303 aa8.66□□□□□ -1.02
ERCC3-208ENST00000491292 IGHV5-51A0A0C4DH38 117 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 A0A1W2PPQ1 181 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 OR5H15A6NDH6 313 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 OR5H1A6NKK0 313 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 AGAP20933 346 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 BMP5P22003 454 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 ATP6V0CP27449 155 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 CST9LP1Q5W188 147 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 MYOZ1Q9NP98 299 aaPredicted RBP8.65□□□□□ -1.02
ERCC3-208ENST00000491292 TIMM10BQ9Y5J6 103 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 COL4A6Q14031 1691 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 WIPF3A6NGB9 483 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 SSTP61278 116 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 FUT7Q11130 342 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 ZNF266Q14584 549 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 TGIF2LXQ8IUE1 241 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 MRGPRX1Q96LB2 322 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 PLK3Q9H4B4 646 aa8.65□□□□□ -1.02
ERCC3-208ENST00000491292 STRAPQ9Y3F4 350 aaKnown RBP8.65□□□□□ -1.02
ERCC3-208ENST00000491292 A0A0A6YYD4 124 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 NPIPA2E9PIF3 369 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 NPIPA3F8WFD2 350 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 DEDDO75618 318 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 PNLIPP16233 465 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 FSTP19883 344 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 FOXK1P85037 733 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 KHDC3LQ587J8 217 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 C9orf135Q5VTT2 229 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 RAET1LQ5VY80 246 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 WDR25Q64LD2 544 aaPredicted RBP8.65□□□□□ -1.03
ERCC3-208ENST00000491292 LFNGQ8NES3 379 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 UBALD1Q8TB05 177 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 TCTN2Q96GX1 697 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 METTL9Q9H1A3 318 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 IL23AQ9NPF7 189 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 NECAP2Q9NVZ3 263 aa8.65□□□□□ -1.03
ERCC3-208ENST00000491292 TRGC1P0CF51 173 aa8.64□□□□□ -1.03
ERCC3-208ENST00000491292 IGFBP3P17936 291 aaPredicted RBP8.64□□□□□ -1.03
ERCC3-208ENST00000491292 GABRA4P48169 554 aa8.64□□□□□ -1.03
ERCC3-208ENST00000491292 ERVS71-1P61550 626 aa8.64□□□□□ -1.03
ERCC3-208ENST00000491292 PNLIPRP3Q17RR3 467 aa8.64□□□□□ -1.03
ERCC3-208ENST00000491292 FAM166AQ6J272 317 aa8.64□□□□□ -1.03
ERCC3-208ENST00000491292 DOK3Q7L591 496 aa8.64□□□□□ -1.03
ERCC3-208ENST00000491292 C7orf61Q8IZ16 206 aa8.64□□□□□ -1.03
ERCC3-208ENST00000491292 CCDC71LQ8N9Z2 235 aa8.64□□□□□ -1.03
ERCC3-208ENST00000491292 MTIF3Q9H2K0 278 aaKnown RBP8.64□□□□□ -1.03
ERCC3-208ENST00000491292 CA14Q9ULX7 337 aa8.64□□□□□ -1.03
ERCC3-208ENST00000491292 DOCK7Q96N67 2140 aa8.64□□□□□ -1.03
ERCC3-208ENST00000491292 KIAA2026Q5HYC2 2103 aa8.64□□□□□ -1.03
ERCC3-208ENST00000491292 IGKV1D-8A0A087WSZ0 117 aa8.64□□□□□ -1.03
ERCC3-208ENST00000491292 DDAH2O95865 285 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms