RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 SLC9A8Q9Y2E8 581 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 RTTNQ86VV8 2226 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 ACANP16112 2415 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 DSPPQ9NZW4 1301 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 SPTBP11277 2137 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 CSPG4Q6UVK1 2322 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 ABCA4P78363 2273 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 PKDREJQ9NTG1 2253 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 IGKV1D-42A0A075B6H8 117 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 IGHV3OR16-12A0A075B7B8 117 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 A0A096LPI6 279 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 ARPC4-TTLL3A0A0A6YYG9 625 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 IGHV1-18A0A0C4DH31 117 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 LOC102725191A0A1B0GVB3 256 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 TMEM120BA0PK00 339 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 OR6C65A6NJZ3 312 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 TRIM64CA6NLI5 447 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 TRPC5OSA6NMA1 111 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 FTCDNL1E5RQL4 147 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 ATP6V1G2-DDX39BF2Z307 99 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 RPL36A-HNRNPH2H7BZ11 118 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 RFXANKO14593 260 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 UBDO15205 165 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 UPK3AO75631 287 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 LY6HO94772 140 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 VAMP5O95183 116 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 IGFBP1P08833 259 aaPredicted RBP2.18□□□□□ -2.06
PHC3-213ENST00000491258 CSF3P09919 207 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 OR4A8P0C604 315 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 CECR9P0C854 216 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 IDO1P14902 403 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 UQCRBP14927 111 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 ZNF44P15621 663 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 CBR1P16152 277 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 PAX7P23759 505 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 CALCRP30988 508 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 CRATP43155 626 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 MRPL19P49406 292 aaKnown RBP2.18□□□□□ -2.06
PHC3-213ENST00000491258 ARHGDIAP52565 204 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 CRISP3P54108 245 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 SLC18A1P54219 525 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 COPZ1P61923 177 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 HPCAP84074 193 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 HOXC5Q00444 222 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 CHRNB3Q05901 458 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 RGNQ15493 299 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 OR7A5Q15622 319 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 ZSWIM7Q19AV6 140 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 C6orf52Q5T4I8 152 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 HHATQ5VTY9 493 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 PRAMEF8Q5VWM4 474 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 PRAMEF7Q5VXH5 474 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 TMEM225Q6GV28 225 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 NIPAL3Q6P499 406 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 C16orf87Q6PH81 154 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 CLEC2AQ6UVW9 174 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 C6orf89Q6UWU4 347 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 ZNF836Q6ZNA1 936 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 MSANTD1Q6ZTZ1 278 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 NET1Q7Z628 596 aaPredicted RBP2.18□□□□□ -2.06
PHC3-213ENST00000491258 COMTD1Q86VU5 262 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 FUNDC1Q8IVP5 155 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 MSRB3Q8IXL7 192 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 CCDC36Q8IYA8 594 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 C20orf196Q8IYI0 205 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 TMEM123Q8N131 208 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 KDM8Q8N371 416 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 CADM2Q8N3J6 435 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 GVQW1Q8N7I0 195 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 ARIH2OSQ8N7S6 290 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 NHLRC2Q8NBF2 726 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 OR4F15Q8NGB8 312 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 MFSD8Q8NHS3 518 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 PNPT1Q8TCS8 783 aaKnown RBP2.18□□□□□ -2.06
PHC3-213ENST00000491258 GTF2H4Q92759 462 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 CORO2AQ92828 525 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 MAL2Q969L2 176 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 SLC35B4Q969S0 331 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 SLC41A3Q96GZ6 507 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 ITCHQ96J02 903 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 ZNF317Q96PQ6 595 aaPredicted RBP2.18□□□□□ -2.06
PHC3-213ENST00000491258 SLC38A2Q96QD8 506 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 OR52B2Q96RD2 323 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 ZBTB18Q99592 522 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 DOK1Q99704 481 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 TAPBPLQ9BX59 468 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 BEX2Q9BXY8 128 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 LINC00470Q9BZP3 86 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 ARMC7Q9H6L4 198 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 TPT1P8Q9HAU6 139 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 ADGRL4Q9HBW9 690 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 BCL2L10Q9HD36 194 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 THUMPD1Q9NXG2 353 aaKnown RBP2.18□□□□□ -2.06
PHC3-213ENST00000491258 B3GNT2Q9NY97 397 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 CALML5Q9NZT1 146 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 SEC14L4Q9UDX3 406 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 PSORS1C1Q9UIG5 152 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 RASD1Q9Y272 281 aa2.18□□□□□ -2.06
PHC3-213ENST00000491258 ZNF443Q9Y2A4 671 aaPredicted RBP2.18□□□□□ -2.06
PHC3-213ENST00000491258 IFT52Q9Y366 437 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms