RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 MAGEA13PA6NCF6 341 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 WNT9BO14905 357 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 AKR7A2O43488 359 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 WNT2P09544 360 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 NPY4RP50391 375 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 PSMD7P51665 324 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 TIMM50Q3ZCQ8 353 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 FAM201AQ5SY85 155 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 STUMQ69YW2 141 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 ACP7Q6ZNF0 438 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 GDPGP1Q6ZNW5 385 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 LYPD6Q86Y78 171 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 Q8NFD4 153 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 OR51F2Q8NH61 342 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 IL36GQ9NZH8 169 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 DNAJB11Q9UBS4 358 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 STUB1Q9UNE7 303 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 POLR3KQ9Y2Y1 108 aaPredicted RBP13.24□□□□□ -0.29
TRA2A-208ENST00000490942 F8P00451 2351 aa13.24□□□□□ -0.29
TRA2A-208ENST00000490942 TRAV1-2A0A0B4J238 106 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 A0A1W2PPK0 400 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 A8MXK9 166 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 B4DSR2 109 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 C3orf80F5H4A9 247 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 TRAPPC2LH3BP13 241 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 GPR37O15354 613 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 ZNF780AO75290 641 aaPredicted RBP13.23□□□□□ -0.29
TRA2A-208ENST00000490942 NXPH2O95156 264 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 KNG1P01042 644 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 SMIM18P0DKX4 95 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 CD80P33681 288 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 POU3F4P49335 361 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 INSL4Q14641 139 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 LCE2DQ5TA82 110 aaPredicted RBP13.23□□□□□ -0.29
TRA2A-208ENST00000490942 GLT8D1Q68CQ7 371 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 SFRP4Q6FHJ7 346 aaPredicted RBP13.23□□□□□ -0.29
TRA2A-208ENST00000490942 ELP2Q6IA86 826 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 FIP1L1Q6UN15 594 aaKnown RBP13.23□□□□□ -0.29
TRA2A-208ENST00000490942 SLC36A1Q7Z2H8 476 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 BOLLQ8N9W6 283 aaKnown RBP13.23□□□□□ -0.29
TRA2A-208ENST00000490942 ANGPTL6Q8NI99 470 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 NEIL1Q96FI4 390 aaPredicted RBP13.23□□□□□ -0.29
TRA2A-208ENST00000490942 GPER1Q99527 375 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 MRPS26Q9BYN8 205 aaKnown RBP13.23□□□□□ -0.29
TRA2A-208ENST00000490942 WDR13Q9H1Z4 485 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 SMURF1Q9HCE7 757 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 PCDHB16Q9NRJ7 776 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 GHRLQ9UBU3 117 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 ACANP16112 2415 aa13.23□□□□□ -0.29
TRA2A-208ENST00000490942 PPIAL4CA0A0B4J2A2 164 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 OR2AT4A6NND4 320 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 FOXH1O75593 365 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 TMEM225BP0DP42 221 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 RPS2P15880 293 aaKnown RBP13.22□□□□□ -0.29
TRA2A-208ENST00000490942 PTGFRP43088 359 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 MTNR1BP49286 362 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 GPR176Q14439 515 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 SPIN3Q5JUX0 258 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 CYB5R2Q6BCY4 276 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 LRRTM1Q86UE6 522 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 LINC01356Q8N9X3 169 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 DEFB108BQ8NET1 73 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 OR8B3Q8NGG8 313 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 TNFAIP8L1Q8WVP5 186 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 ORAI1Q96D31 301 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 SDSLQ96GA7 329 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 MED30Q96HR3 178 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 OR8B2Q96RD0 313 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 PPIL3Q9H2H8 161 aaKnown RBP13.22□□□□□ -0.29
TRA2A-208ENST00000490942 ZNF222Q9UK12 451 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 SSR3Q9UNL2 185 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 GSTK1Q9Y2Q3 226 aa13.22□□□□□ -0.29
TRA2A-208ENST00000490942 MAP1AP78559 2803 aaPredicted RBP13.22□□□□□ -0.29
TRA2A-208ENST00000490942 HIVEP1P15822 2718 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 IGKV1-12A0A0C4DH73 117 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 NKX6-3A6NJ46 265 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 ZNF205O95201 554 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 IGKV1D-12P01611 117 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 MAS1P04201 325 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 IGHV4-31P0DP07 118 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 CD36P16671 472 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 CALRP27797 417 aaKnown RBP13.21□□□□□ -0.29
TRA2A-208ENST00000490942 HNRNPA0Q13151 305 aaKnown RBP13.21□□□□□ -0.29
TRA2A-208ENST00000490942 ZNF146Q15072 292 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 ESCO2Q56NI9 601 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 FAM27D1Q5T7N8 215 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 ZNF788Q6ZQV5 615 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 SATL1Q86VE3 508 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 FAM58AQ8N1B3 248 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 SLAMF9Q96A28 289 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 MRPS24Q96EL2 167 aaKnown RBP13.21□□□□□ -0.29
TRA2A-208ENST00000490942 DMRTB1Q96MA1 342 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 SPACA5Q96QH8 159 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 NARFLQ9H6Q4 476 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 HMG20AQ9NP66 347 aa13.21□□□□□ -0.29
TRA2A-208ENST00000490942 PDCD5O14737 125 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 SMAD7O15105 426 aaKnown RBP13.2□□□□□ -0.3
TRA2A-208ENST00000490942 SIGLEC5O15389 551 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 SPRY1O43609 319 aaPredicted RBP13.2□□□□□ -0.3
TRA2A-208ENST00000490942 CD5LO43866 347 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms