RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 ABRACLQ9P1F3 81 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 STEAP1Q9UHE8 339 aa6.43□□□□□ -1.38
CLDN1-202ENST00000490800 IGHV2OR16-5A0A0B4J2B6 119 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 ZNF816-ZNF321PA0A0X1KG74 233 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 J3QRK9 145 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 ALDOBP05062 364 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 EIF4EP06730 217 aaKnown RBP6.42□□□□□ -1.38
CLDN1-202ENST00000490800 ERCC1P07992 297 aaPredicted RBP6.42□□□□□ -1.38
CLDN1-202ENST00000490800 OR4A8P0C604 315 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 CALCBP10092 127 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 ELK1P19419 428 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 CALCRP30988 508 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 PPP1CBP62140 327 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 NAAAQ02083 359 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 UBE2V2Q15819 145 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 ADIPOQQ15848 244 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 CHRFAM7AQ494W8 412 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 CLVS2Q5SYC1 327 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 XP32Q5T750 250 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 CYB5R2Q6BCY4 276 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 CNIH2Q6PI25 160 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 CRIP3Q6Q6R5 217 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 KRT74Q7RTS7 529 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 MRPL21Q7Z2W9 205 aaKnown RBP6.42□□□□□ -1.38
CLDN1-202ENST00000490800 JAGN1Q8N5M9 183 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 SAMD12Q8N8I0 201 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 OR56B2PQ8NGI1 322 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 OR5L1Q8NGL2 311 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 ZNF671Q8TAW3 534 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 ITFG2Q969R8 447 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 FOXRED1Q96CU9 486 aaPredicted RBP6.42□□□□□ -1.38
CLDN1-202ENST00000490800 SORCS2Q96PQ0 1159 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 SOSTQ9BQB4 213 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 MRI1Q9BV20 369 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 OPA3Q9H6K4 179 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 PPP1R3EQ9H7J1 279 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 PLGRKTQ9HBL7 147 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 HMG20AQ9NP66 347 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 GPR173Q9NS66 373 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 CA10Q9NS85 328 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 EIF3KQ9UBQ5 218 aaKnown RBP6.42□□□□□ -1.38
CLDN1-202ENST00000490800 OR5V1Q9UGF6 321 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 SPATA2Q9UM82 520 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 V9GYH0 126 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 X6R8D5 127 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 SONP18583 2426 aaKnown RBP6.42□□□□□ -1.38
CLDN1-202ENST00000490800 SVEP1Q4LDE5 3571 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 ABCA1O95477 2261 aa6.42□□□□□ -1.38
CLDN1-202ENST00000490800 GGT3PA6NGU5 568 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 CD300LBA8K4G0 201 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 B9A039 149 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 LDLRAD4O15165 306 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 GMDSO60547 372 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 CST4P01036 141 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 NRASP01111 189 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 IFNA2P01563 188 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 USF1P22415 310 aaPredicted RBP6.41□□□□□ -1.38
CLDN1-202ENST00000490800 AZGP1P25311 298 aaKnown RBP6.41□□□□□ -1.38
CLDN1-202ENST00000490800 HTR2CP28335 458 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 EVX1P49640 407 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 PDLIM4P50479 330 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 UCP2P55851 309 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 ERVS71-1P61550 626 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 SNRPD2P62316 118 aaKnown RBP6.41□□□□□ -1.38
CLDN1-202ENST00000490800 ZNF45Q02386 682 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 PLA2G7Q13093 441 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 CARTPTQ16568 116 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 DMRTC1Q5HYR2 192 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 UBE2NLQ5JXB2 153 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 SPANXN2Q5MJ10 180 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 SPATA46Q5T0L3 261 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 FBXW12Q6X9E4 464 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 LRRC28Q86X40 367 aaPredicted RBP6.41□□□□□ -1.38
CLDN1-202ENST00000490800 CDH26Q8IXH8 852 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 CMTM4Q8IZR5 234 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 ZCCHC24Q8N2G6 241 aaKnown RBP6.41□□□□□ -1.38
CLDN1-202ENST00000490800 CSNK2A3Q8NEV1 391 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 OR4D6Q8NGJ1 314 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 OR6M1Q8NGM8 313 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 SPATA3Q8NHX4 192 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 SLC25A40Q8TBP6 338 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 NPRL2Q8WTW4 380 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 PIGCQ92535 297 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 BORCS5Q969J3 196 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 FAM3DQ96BQ1 224 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 SLC25A38Q96DW6 304 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 DIRAS2Q96HU8 199 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 CMTM3Q96MX0 182 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 SPACA5Q96QH8 159 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 UQCC2Q9BRT2 126 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 BEX2Q9BXY8 128 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 OR2J1Q9GZK6 312 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 KCNK15Q9H427 330 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 METTL17Q9H7H0 456 aaPredicted RBP6.41□□□□□ -1.38
CLDN1-202ENST00000490800 CNTD2Q9H8S5 307 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 CYSLTR2Q9NS75 346 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 ETV7Q9Y603 341 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 CR1P17927 2039 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 PLCE1Q9P212 2302 aa6.41□□□□□ -1.38
CLDN1-202ENST00000490800 COL6A5A8TX70 2615 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms