RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 A0A0U1RQK1 487 aa16.22■□□□□ 0.19
SMC4-222ENST00000490207 J3QLW9 94 aa16.22■□□□□ 0.19
SMC4-222ENST00000490207 ZNF19P17023 458 aa16.22■□□□□ 0.19
SMC4-222ENST00000490207 FUT6P51993 359 aa16.22■□□□□ 0.19
SMC4-222ENST00000490207 DLX1P56177 255 aa16.22■□□□□ 0.19
SMC4-222ENST00000490207 NANOS3P60323 173 aaKnown RBP16.22■□□□□ 0.19
SMC4-222ENST00000490207 PRB3Q04118 309 aaPredicted RBP16.22■□□□□ 0.19
SMC4-222ENST00000490207 KLRD1Q13241 179 aa16.22■□□□□ 0.19
SMC4-222ENST00000490207 FDX2Q6P4F2 183 aa16.22■□□□□ 0.19
SMC4-222ENST00000490207 C16orf87Q6PH81 154 aa16.22■□□□□ 0.19
SMC4-222ENST00000490207 ZNF561Q8N587 486 aa16.22■□□□□ 0.19
SMC4-222ENST00000490207 RHOXF1Q8NHV9 184 aa16.22■□□□□ 0.19
SMC4-222ENST00000490207 PP6455Q8WZ26 134 aa16.22■□□□□ 0.19
SMC4-222ENST00000490207 MYCBPQ99417 103 aaPredicted RBP16.22■□□□□ 0.19
SMC4-222ENST00000490207 ALG8Q9BVK2 526 aa16.22■□□□□ 0.19
SMC4-222ENST00000490207 FAM118AQ9NWS6 357 aa16.22■□□□□ 0.19
SMC4-222ENST00000490207 FRRS1LQ9P0K9 344 aa16.22■□□□□ 0.19
SMC4-222ENST00000490207 IGKV1-27A0A075B6S5 117 aa16.21■□□□□ 0.19
SMC4-222ENST00000490207 RNASEK-C17orf49H0YIS7 233 aa16.21■□□□□ 0.19
SMC4-222ENST00000490207 ZNF20P17024 532 aa16.21■□□□□ 0.19
SMC4-222ENST00000490207 EEF1B2P24534 225 aaKnown RBP16.21■□□□□ 0.19
SMC4-222ENST00000490207 PRDX2P32119 198 aa16.21■□□□□ 0.19
SMC4-222ENST00000490207 ERVK11-1P61568 191 aa16.21■□□□□ 0.19
SMC4-222ENST00000490207 BLMHQ13867 455 aa16.21■□□□□ 0.19
SMC4-222ENST00000490207 PIP4P2Q8N4L2 257 aa16.21■□□□□ 0.19
SMC4-222ENST00000490207 SSMEM1Q8WWF3 244 aa16.21■□□□□ 0.19
SMC4-222ENST00000490207 ADAT3Q96EY9 351 aaPredicted RBP16.21■□□□□ 0.19
SMC4-222ENST00000490207 PELI1Q96FA3 418 aa16.21■□□□□ 0.19
SMC4-222ENST00000490207 POMT1Q9Y6A1 747 aa16.21■□□□□ 0.19
SMC4-222ENST00000490207 KNG1P01042 644 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 ISG15P05161 165 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 CCR9P51686 369 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 RAB40BQ12829 278 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 GALEQ14376 348 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 NCR3LG1Q68D85 454 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 C1orf122Q6ZSJ8 110 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 LHFPL3Q86UP9 236 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 LDLRAD3Q86YD5 345 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 ZNF555Q8NEP9 628 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 TAF15Q92804 592 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMC4-222ENST00000490207 SLAMF9Q96A28 289 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 CEP19Q96LK0 163 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 RDH12Q96NR8 316 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 CHIAQ9BZP6 476 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 METTL8Q9H825 291 aaKnown RBP16.2■□□□□ 0.18
SMC4-222ENST00000490207 AMBNQ9NP70 447 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 C19orf12Q9NSK7 152 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 SMPD3Q9NY59 655 aaPredicted RBP16.2■□□□□ 0.18
SMC4-222ENST00000490207 HHLA2Q9UM44 414 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 MYRFQ9Y2G1 1151 aa16.2■□□□□ 0.18
SMC4-222ENST00000490207 CAB39Q9Y376 341 aaPredicted RBP16.2■□□□□ 0.18
SMC4-222ENST00000490207 A0A1W2PRD5 423 aa16.19■□□□□ 0.18
SMC4-222ENST00000490207 A0A1W2PRF3 423 aa16.19■□□□□ 0.18
SMC4-222ENST00000490207 A0A1W2PRM7 423 aa16.19■□□□□ 0.18
SMC4-222ENST00000490207 NPFFO15130 113 aa16.19■□□□□ 0.18
SMC4-222ENST00000490207 FADS2O95864 444 aaKnown RBP16.19■□□□□ 0.18
SMC4-222ENST00000490207 IGHA1P01876 353 aa16.19■□□□□ 0.18
SMC4-222ENST00000490207 ATP1B3P54709 279 aa16.19■□□□□ 0.18
SMC4-222ENST00000490207 ALKBH1Q13686 389 aaKnown RBP16.19■□□□□ 0.18
SMC4-222ENST00000490207 FIP1L1Q6UN15 594 aaKnown RBP16.19■□□□□ 0.18
SMC4-222ENST00000490207 SLC25A26Q70HW3 274 aa16.19■□□□□ 0.18
SMC4-222ENST00000490207 SYS1Q8N2H4 156 aa16.19■□□□□ 0.18
SMC4-222ENST00000490207 TBC1D15Q8TC07 691 aa16.19■□□□□ 0.18
SMC4-222ENST00000490207 APH1BQ8WW43 257 aa16.19■□□□□ 0.18
SMC4-222ENST00000490207 TNFRSF14Q92956 283 aa16.19■□□□□ 0.18
SMC4-222ENST00000490207 UNKLQ9H9P5 680 aaKnown RBP16.19■□□□□ 0.18
SMC4-222ENST00000490207 INPP5EQ9NRR6 644 aa16.19■□□□□ 0.18
SMC4-222ENST00000490207 MTCH1Q9NZJ7 389 aa16.19■□□□□ 0.18
SMC4-222ENST00000490207 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.19■□□□□ 0.18
SMC4-222ENST00000490207 FAM96BQ9Y3D0 163 aa16.19■□□□□ 0.18
SMC4-222ENST00000490207 FAM181BA6NEQ2 426 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 OR4C45A6NMZ5 311 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 H0YAE9 185 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 INMTO95050 263 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 FBP1P09467 338 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 ATF1P18846 271 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 AZGP1P25311 298 aaKnown RBP16.18■□□□□ 0.18
SMC4-222ENST00000490207 RBP2P50120 134 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 RPL31P62899 125 aaKnown RBP16.18■□□□□ 0.18
SMC4-222ENST00000490207 UTS2BQ765I0 119 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 ZNF676Q8N7Q3 588 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 ASCC1Q8N9N2 400 aaKnown RBP16.18■□□□□ 0.18
SMC4-222ENST00000490207 DNAAF1Q8NEP3 725 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 OR51A4Q8NGJ6 313 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 OR52I1Q8NGK6 324 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 OR13C3Q8NGS6 347 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 OR10AC1Q8NH08 325 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 FGGYQ96C11 551 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 ZNF747Q9BV97 191 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 FAM234AQ9H0X4 552 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 ERVK13-1Q9NX77 482 aa16.18■□□□□ 0.18
SMC4-222ENST00000490207 RPL36Q9Y3U8 105 aaKnown RBP16.18■□□□□ 0.18
SMC4-222ENST00000490207 IGKV1-9A0A0C4DH69 117 aa16.17■□□□□ 0.18
SMC4-222ENST00000490207 A0A1W2PPH5 198 aa16.17■□□□□ 0.18
SMC4-222ENST00000490207 F8VVB4 439 aa16.17■□□□□ 0.18
SMC4-222ENST00000490207 F8VWA3 439 aa16.17■□□□□ 0.18
SMC4-222ENST00000490207 IGHV4-59P01825 116 aa16.17■□□□□ 0.18
SMC4-222ENST00000490207 TK1P04183 234 aa16.17■□□□□ 0.18
SMC4-222ENST00000490207 CRYBA1P05813 215 aa16.17■□□□□ 0.18
SMC4-222ENST00000490207 PRKACBP22694 351 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms