RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 CYTL1Q9NRR1 136 aa13.66□□□□□ -0.22
BRD9-208ENST00000489816 CCDC163A0A0D9SF12 145 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 OR7C1O76099 320 aaPredicted RBP13.65□□□□□ -0.22
BRD9-208ENST00000489816 NRASP01111 189 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 TPT1P13693 172 aaKnown RBP13.65□□□□□ -0.22
BRD9-208ENST00000489816 RPS2P15880 293 aaKnown RBP13.65□□□□□ -0.22
BRD9-208ENST00000489816 B3GALT5-AS1P59052 145 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 RIPPLY1Q0D2K3 151 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 SCRN3Q0VDG4 424 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 PNLIPRP3Q17RR3 467 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 LHFPL1Q86WI0 220 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 EMG1Q92979 244 aaKnown RBP13.65□□□□□ -0.22
BRD9-208ENST00000489816 CALHM2Q9HA72 323 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 MED9Q9NWA0 146 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 ICE1Q9Y2F5 2266 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 A0A087WZY1 265 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 ARPC4-TTLL3A0A0A6YYG9 625 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 TRIM77I1YAP6 450 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 NTN3O00634 580 aaPredicted RBP13.65□□□□□ -0.22
BRD9-208ENST00000489816 LRP3O75074 770 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 PIGPP57054 158 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 TAS2R46P59540 309 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 SRSF4Q08170 494 aaKnown RBP13.65□□□□□ -0.22
BRD9-208ENST00000489816 PLCXD3Q63HM9 321 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 CALHM1Q8IU99 346 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 OR52H1Q8NGJ2 320 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 M1APQ8TC57 530 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 TMEM38BQ9NVV0 291 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 ST3GAL6Q9Y274 331 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 DMXL1Q9Y485 3027 aa13.65□□□□□ -0.22
BRD9-208ENST00000489816 SYNGR3O43761 229 aa13.65□□□□□ -0.23
BRD9-208ENST00000489816 FARS2O95363 451 aaKnown RBP13.65□□□□□ -0.23
BRD9-208ENST00000489816 ONECUT2O95948 504 aa13.65□□□□□ -0.23
BRD9-208ENST00000489816 HLA-HP01893 362 aa13.65□□□□□ -0.23
BRD9-208ENST00000489816 NAT1P18440 290 aa13.65□□□□□ -0.23
BRD9-208ENST00000489816 MPZP25189 248 aa13.65□□□□□ -0.23
BRD9-208ENST00000489816 MRPS34P82930 218 aaKnown RBP13.65□□□□□ -0.23
BRD9-208ENST00000489816 RBM39Q14498 530 aaKnown RBP13.65□□□□□ -0.23
BRD9-208ENST00000489816 CT55Q8WUE5 264 aa13.65□□□□□ -0.23
BRD9-208ENST00000489816 METTL9Q9H1A3 318 aa13.65□□□□□ -0.23
BRD9-208ENST00000489816 ZNF716A6NP11 495 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 NR2C1P13056 603 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 CTSSP25774 331 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 OTX1P32242 354 aaPredicted RBP13.64□□□□□ -0.23
BRD9-208ENST00000489816 RBP2P50120 134 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 TFAP2EQ6VUC0 442 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 OR10AD1Q8NGE0 317 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 THOC3Q96J01 351 aaKnown RBP13.64□□□□□ -0.23
BRD9-208ENST00000489816 Q96M66 194 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 HS3ST6Q96QI5 342 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 NMES1Q9C002 83 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 CRIM1Q9NZV1 1036 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 ANXA10Q9UJ72 324 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 LRRC3CA6NJW4 275 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 TOR1AO14656 332 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 SNAPC5O75971 98 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 NXPH3O95157 252 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 IGLV3-1P01715 115 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 SLC22A25Q6T423 547 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 CBLN2Q8IUK8 224 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 CPEB3Q8NE35 698 aaKnown RBP13.64□□□□□ -0.23
BRD9-208ENST00000489816 BSCL2Q96G97 398 aaPredicted RBP13.64□□□□□ -0.23
BRD9-208ENST00000489816 PAPOLGQ9BWT3 736 aaKnown RBP13.64□□□□□ -0.23
BRD9-208ENST00000489816 LRFN1Q9P244 771 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 IL36RNQ9UBH0 155 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 PRELID1Q9Y255 219 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 LOXL2Q9Y4K0 774 aa13.64□□□□□ -0.23
BRD9-208ENST00000489816 SERPINE3A8MV23 424 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 IFNA2P01563 188 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 ADCYAP1P18509 176 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 FCGR2CP31995 323 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 CYB561P49447 251 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 ZXDAP98168 799 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 PABPC1L2AQ5JQF8 200 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 DCAF12Q5T6F0 453 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 MEX3BQ6ZN04 569 aaKnown RBP13.63□□□□□ -0.23
BRD9-208ENST00000489816 SLC25A26Q70HW3 274 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 C2orf50Q96LR7 162 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 ZNF442Q9H7R0 627 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 RAB18Q9NP72 206 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 FOXI3A8MTJ6 420 aaPredicted RBP13.63□□□□□ -0.23
BRD9-208ENST00000489816 F8W036 122 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 OR5AC1P0C628 307 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 CRYGSP22914 178 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 BLOC1S1P78537 153 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 CYCSP99999 105 aaKnown RBP13.63□□□□□ -0.23
BRD9-208ENST00000489816 SPEM2Q0P670 501 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 LYZL2Q7Z4W2 148 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 SGPP2Q8IWX5 399 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 ASB13Q8WXK3 278 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 TLNRD1Q9H1K6 362 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 LDAHQ9H6V9 325 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 ZNF239Q16600 458 aaKnown RBP13.63□□□□□ -0.23
BRD9-208ENST00000489816 ACTBL2Q562R1 376 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 PRSS54Q6PEW0 395 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 PEG10Q86TG7 708 aaKnown RBP13.63□□□□□ -0.23
BRD9-208ENST00000489816 PUSL1Q8N0Z8 303 aaKnown RBP13.63□□□□□ -0.23
BRD9-208ENST00000489816 SIGLEC12Q96PQ1 595 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 WNT5BQ9H1J7 359 aa13.63□□□□□ -0.23
BRD9-208ENST00000489816 SH2D2AQ9NP31 389 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms