RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 MAPKAPK5-AS1Q8N8E1 139 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 FAM156AQ8NDB6 213 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 OR56B4Q8NH76 319 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 RPEQ96AT9 228 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 OR8B4Q96RC9 309 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 IKZF5Q9H5V7 419 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 FAM53CQ9NYF3 392 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 A0A1B0GVY2 172 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 H0Y980 276 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 OR5H8P0DN80 308 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 PSMB8P28062 276 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 SLC15A1P46059 708 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 ZP1P60852 638 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 HAGHLQ6PII5 290 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-233ENST00000489352 ZNF730Q6ZMV8 503 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 DCXRQ7Z4W1 244 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 RNF113BQ8IZP6 322 aaKnown RBP8.86□□□□□ -0.99
HDAC6-233ENST00000489352 LINC00471Q8N535 108 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 AQP3Q92482 292 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 TOMM40LQ969M1 308 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 SORT1Q99523 831 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 CHCHD6Q9BRQ6 235 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 OR10A2Q9H208 303 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 OR51I2Q9H344 312 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 NRIP3Q9NQ35 241 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 RPRD1BQ9NQG5 326 aaKnown RBP8.86□□□□□ -0.99
HDAC6-233ENST00000489352 SLC22A13Q9Y226 551 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 GMEB1Q9Y692 573 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 LINC00312Q9Y6C7 94 aa8.86□□□□□ -0.99
HDAC6-233ENST00000489352 SHISA3A0PJX4 238 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 FAM172BPA6NC97 362 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 PRSS29PA6NIE9 313 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 FAM183AA6NL82 134 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 TYROBPO43914 113 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 CST4P01036 141 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 APOC1P02654 83 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 RPS27P42677 84 aaKnown RBP8.85□□□□□ -0.99
HDAC6-233ENST00000489352 CX3CR1P49238 355 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 STX1BP61266 288 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 STX3Q13277 289 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 FAM53AQ6NSI3 398 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-233ENST00000489352 FAM57BQ71RH2 274 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 IFT20Q8IY31 132 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 ZNF491Q8N8L2 437 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 POC1AQ8NBT0 407 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 ZNF488Q96MN9 340 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 FNDC11Q9BVV2 318 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 ABCG5Q9H222 651 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 GLS2Q9UI32 602 aa8.85□□□□□ -0.99
HDAC6-233ENST00000489352 FAM90A18PA6NE21 464 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 FAM90A16PA6NEW6 464 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 FAM90A20PA6NIJ5 464 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 FAM90A9PA6NNJ1 464 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 FAM90A12PA8MX19 464 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 FAM90A5PA8MXJ8 464 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 CDC42EP2O14613 210 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 IGLV1-47P01700 117 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 IGLV1-51P01701 117 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 IGF1P05019 195 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 FAM90A15PP0C7V4 464 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 FAM90A13PP0C7W8 464 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 FAM90A14PP0C7W9 464 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 FAM90A24PP0C7X0 464 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 KITP10721 976 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 FASP25445 335 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 GRB2P62993 217 aaKnown RBP8.84□□□□□ -0.99
HDAC6-233ENST00000489352 TRAM2Q15035 370 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 RBMY1FQ15415 496 aaKnown RBP8.84□□□□□ -0.99
HDAC6-233ENST00000489352 HLA-DRB5Q30154 266 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 CEP78Q5JTW2 689 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 DPY19L2P2Q6ZN68 376 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 HPSE2Q8WWQ2 592 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 RGP1Q92546 391 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-233ENST00000489352 SLAMF6Q96DU3 332 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 PGAM5Q96HS1 289 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 KCTD7Q96MP8 289 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 ERMAPQ96PL5 475 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-233ENST00000489352 NMNAT3Q96T66 252 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 RASL11BQ9BPW5 248 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 GAL3ST2Q9H3Q3 398 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 RGCCQ9H4X1 137 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 VIPAS39Q9H9C1 493 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 BRD7Q9NPI1 651 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 LIN7CQ9NUP9 197 aaKnown RBP8.84□□□□□ -0.99
HDAC6-233ENST00000489352 HAO1Q9UJM8 370 aa8.84□□□□□ -0.99
HDAC6-233ENST00000489352 MRPS28Q9Y2Q9 187 aaKnown RBP8.84□□□□□ -0.99
HDAC6-233ENST00000489352 ZNF878C9JN71 531 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 BIRC5O15392 142 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 MMP23AO75900 390 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 IGKV1D-33P01593 117 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 IGKV1-33P01594 117 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 KPNB1Q14974 876 aaKnown RBP8.83□□□□□ -1
HDAC6-233ENST00000489352 CEACAM21Q3KPI0 293 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 KLHL12Q53G59 568 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 PAGE3Q5JUK9 113 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 PRAMEF5Q5TYX0 476 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 TGIF2LXQ8IUE1 241 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 OR8H2Q8N162 312 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 FAM81AQ8TBF8 368 aa8.83□□□□□ -1
HDAC6-233ENST00000489352 UTP4Q969X6 686 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms