RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 TNFAIP8O95379 198 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 YEATS4O95619 227 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 MRPL3P09001 348 aaKnown RBP2.6□□□□□ -1.99
XRN1-213ENST00000489241 ZNF32P17041 273 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 IL1RNP18510 177 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 TUFMP49411 452 aaKnown RBP2.6□□□□□ -1.99
XRN1-213ENST00000489241 AQP5P55064 265 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 TRDNQ13061 729 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 DMC1Q14565 340 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 SYCP1Q15431 976 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 FAM71E1Q6IPT2 247 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 BHLHA15Q7RTS1 189 aaPredicted RBP2.6□□□□□ -1.99
XRN1-213ENST00000489241 SLC25A29Q8N8R3 303 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 NECAP1Q8NC96 275 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 OR4K17Q8NGC6 315 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 IFT81Q8WYA0 676 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 RORBQ92753 470 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 SMIM8Q96KF7 97 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 QKIQ96PU8 341 aaKnown RBP eCLIP2.6□□□□□ -1.99
XRN1-213ENST00000489241 OR2M4Q96R27 311 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 NDEL1Q9GZM8 345 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 ZNHIT6Q9NWK9 470 aaKnown RBP2.6□□□□□ -1.99
XRN1-213ENST00000489241 STX18Q9P2W9 335 aaKnown RBP2.6□□□□□ -1.99
XRN1-213ENST00000489241 ENOPH1Q9UHY7 261 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 SCML1Q9UN30 329 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 USH1CQ9Y6N9 552 aa2.6□□□□□ -1.99
XRN1-213ENST00000489241 LOC102724200A0A096LPH7 203 aaPredicted RBP2.59□□□□□ -1.99
XRN1-213ENST00000489241 IGKV1-6A0A0C4DH72 117 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 A0A0G2JMP0 313 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 CENPVL3A0A0U1RRI6 287 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 A0A0X1KG70 313 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 TMEM72A0PK05 275 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 OR2AT4A6NND4 320 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 SMLR1H3BR10 107 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 RLN2P04090 185 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 HLA-GP17693 338 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 TAC1P20366 129 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 GTF2H1P32780 548 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 XKP51811 444 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 OR10A3P58181 314 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 RPL10AP62906 217 aaKnown RBP2.59□□□□□ -1.99
XRN1-213ENST00000489241 ELF3P78545 371 aaPredicted RBP2.59□□□□□ -1.99
XRN1-213ENST00000489241 CD164Q04900 197 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 PRKCDQ05655 676 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 EBI3Q14213 229 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 FLOT2Q14254 428 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 TRIP13Q15645 432 aaPredicted RBP2.59□□□□□ -1.99
XRN1-213ENST00000489241 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 C5orf47Q569G3 176 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 UGT2A3Q6UWM9 527 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 PRNTQ86SH4 94 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 MRPL52Q86TS9 123 aaKnown RBP2.59□□□□□ -1.99
XRN1-213ENST00000489241 CYP4Z1Q86W10 505 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 CYP4Z2PQ8N1L4 340 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 OR5M1Q8NGP8 315 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 BLNKQ8WV28 456 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 ZMYND19Q96E35 227 aaPredicted RBP2.59□□□□□ -1.99
XRN1-213ENST00000489241 ABCB9Q9NP78 766 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 DNAJC27Q9NZQ0 273 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 OPN4Q9UHM6 478 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 KLF13Q9Y2Y9 288 aaPredicted RBP2.59□□□□□ -1.99
XRN1-213ENST00000489241 CBY1Q9Y3M2 126 aa2.59□□□□□ -1.99
XRN1-213ENST00000489241 USP42Q9H9J4 1324 aaKnown RBP2.59□□□□□ -2
XRN1-213ENST00000489241 LRPPRCP42704 1394 aaKnown RBP2.59□□□□□ -2
XRN1-213ENST00000489241 A0A1B0GX12 115 aa2.58□□□□□ -2
XRN1-213ENST00000489241 RBFOX3A6NFN3 312 aa2.58□□□□□ -2
XRN1-213ENST00000489241 CENPBD1B2RD01 187 aa2.58□□□□□ -2
XRN1-213ENST00000489241 CLDN34H7C241 214 aa2.58□□□□□ -2
XRN1-213ENST00000489241 SULT1C2O00338 296 aa2.58□□□□□ -2
XRN1-213ENST00000489241 CALUO43852 315 aaPredicted RBP2.58□□□□□ -2
XRN1-213ENST00000489241 ZNF324O75467 553 aaPredicted RBP2.58□□□□□ -2
XRN1-213ENST00000489241 CDK14O94921 469 aa2.58□□□□□ -2
XRN1-213ENST00000489241 CYB5R3P00387 301 aaPredicted RBP2.58□□□□□ -2
XRN1-213ENST00000489241 IGKV1-39P01597 117 aa2.58□□□□□ -2
XRN1-213ENST00000489241 PRB2P02812 416 aaPredicted RBP2.58□□□□□ -2
XRN1-213ENST00000489241 IGKV1D-39P04432 117 aa2.58□□□□□ -2
XRN1-213ENST00000489241 IGKV5-2P06315 115 aa2.58□□□□□ -2
XRN1-213ENST00000489241 OR4Q2P0C623 313 aa2.58□□□□□ -2
XRN1-213ENST00000489241 RD3LP0DJH9 198 aa2.58□□□□□ -2
XRN1-213ENST00000489241 MUC1P15941 1255 aaPredicted RBP2.58□□□□□ -2
XRN1-213ENST00000489241 KDELR2P33947 212 aa2.58□□□□□ -2
XRN1-213ENST00000489241 TAS2R43P59537 309 aa2.58□□□□□ -2
XRN1-213ENST00000489241 PFN3P60673 137 aa2.58□□□□□ -2
XRN1-213ENST00000489241 CEACAM21Q3KPI0 293 aa2.58□□□□□ -2
XRN1-213ENST00000489241 LINC00303Q3SY05 128 aa2.58□□□□□ -2
XRN1-213ENST00000489241 OR10J3Q5JRS4 329 aa2.58□□□□□ -2
XRN1-213ENST00000489241 ZNF101Q8IZC7 436 aa2.58□□□□□ -2
XRN1-213ENST00000489241 ORMDL3Q8N138 153 aa2.58□□□□□ -2
XRN1-213ENST00000489241 ZNF738Q8NE65 137 aa2.58□□□□□ -2
XRN1-213ENST00000489241 OR7G1Q8NGA0 311 aa2.58□□□□□ -2
XRN1-213ENST00000489241 UBA3Q8TBC4 463 aa2.58□□□□□ -2
XRN1-213ENST00000489241 ORAOV1Q8WV07 137 aa2.58□□□□□ -2
XRN1-213ENST00000489241 TNFRSF14Q92956 283 aa2.58□□□□□ -2
XRN1-213ENST00000489241 STARD4Q96DR4 205 aa2.58□□□□□ -2
XRN1-213ENST00000489241 OR10C1Q96KK4 312 aa2.58□□□□□ -2
XRN1-213ENST00000489241 DOK1Q99704 481 aa2.58□□□□□ -2
XRN1-213ENST00000489241 LLPHQ9BRT6 129 aaKnown RBP2.58□□□□□ -2
XRN1-213ENST00000489241 MRPL20Q9BYC9 149 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms