RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 POM121Q96HA1 1249 aa17.09■□□□□ 0.33
HMG20B-213ENST00000488973 WASF3Q9UPY6 502 aa17.09■□□□□ 0.33
HMG20B-213ENST00000488973 NCOA6Q14686 2063 aaPredicted RBP17.09■□□□□ 0.33
HMG20B-213ENST00000488973 SHISA7A6NL88 538 aa17.09■□□□□ 0.33
HMG20B-213ENST00000488973 E5RGE8 158 aa17.09■□□□□ 0.33
HMG20B-213ENST00000488973 IGLV3-1P01715 115 aa17.09■□□□□ 0.33
HMG20B-213ENST00000488973 NR2C1P13056 603 aa17.09■□□□□ 0.33
HMG20B-213ENST00000488973 ZNF41P51814 821 aaPredicted RBP17.09■□□□□ 0.33
HMG20B-213ENST00000488973 MRPL24Q96A35 216 aaKnown RBP17.09■□□□□ 0.33
HMG20B-213ENST00000488973 ZNF701Q9NV72 531 aaPredicted RBP17.09■□□□□ 0.33
HMG20B-213ENST00000488973 FAM86C1Q9NVL1 165 aa17.09■□□□□ 0.33
HMG20B-213ENST00000488973 NSG2Q9Y328 171 aa17.09■□□□□ 0.33
HMG20B-213ENST00000488973 IGHV3-20A0A0C4DH32 117 aa17.08■□□□□ 0.33
HMG20B-213ENST00000488973 SERPINA2P20848 420 aa17.08■□□□□ 0.33
HMG20B-213ENST00000488973 ACKR3P25106 362 aa17.08■□□□□ 0.33
HMG20B-213ENST00000488973 CTSSP25774 331 aa17.08■□□□□ 0.33
HMG20B-213ENST00000488973 SUCLG1P53597 346 aaKnown RBP17.08■□□□□ 0.33
HMG20B-213ENST00000488973 D2HGDHQ8N465 521 aa17.08■□□□□ 0.33
HMG20B-213ENST00000488973 ERGIC1Q969X5 290 aa17.08■□□□□ 0.33
HMG20B-213ENST00000488973 CRLF2Q9HC73 371 aa17.08■□□□□ 0.33
HMG20B-213ENST00000488973 SLC2A4RGQ9NR83 387 aa17.08■□□□□ 0.33
HMG20B-213ENST00000488973 LUZP4Q9P127 313 aa17.08■□□□□ 0.33
HMG20B-213ENST00000488973 ARID1AO14497 2285 aa17.08■□□□□ 0.33
HMG20B-213ENST00000488973 IGKV1D-8A0A087WSZ0 117 aa17.08■□□□□ 0.32
HMG20B-213ENST00000488973 CXorf65A6NEN9 183 aa17.08■□□□□ 0.32
HMG20B-213ENST00000488973 MSX1P28360 303 aa17.08■□□□□ 0.32
HMG20B-213ENST00000488973 NHLH2Q02577 135 aa17.08■□□□□ 0.32
HMG20B-213ENST00000488973 HIST3H3Q16695 136 aa17.08■□□□□ 0.32
HMG20B-213ENST00000488973 DEFB133Q30KQ1 61 aa17.08■□□□□ 0.32
HMG20B-213ENST00000488973 C14orf28Q4W4Y0 310 aa17.08■□□□□ 0.32
HMG20B-213ENST00000488973 APCDD1LQ8NCL9 501 aa17.08■□□□□ 0.32
HMG20B-213ENST00000488973 RNF138Q8WVD3 245 aa17.08■□□□□ 0.32
HMG20B-213ENST00000488973 PGAM5Q96HS1 289 aa17.08■□□□□ 0.32
HMG20B-213ENST00000488973 IP6K3Q96PC2 410 aa17.08■□□□□ 0.32
HMG20B-213ENST00000488973 S100A13Q99584 98 aa17.08■□□□□ 0.32
HMG20B-213ENST00000488973 GINS3Q9BRX5 216 aa17.08■□□□□ 0.32
HMG20B-213ENST00000488973 SZT2Q5T011 3432 aa17.08■□□□□ 0.32
HMG20B-213ENST00000488973 BORCS7-ASMTA0A0B4J1R7 106 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 A6NLC8 198 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 DHRS7CA6NNS2 312 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 FOLR1P15328 257 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 RAB5AP20339 215 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 PLPPR5Q32ZL2 321 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 OGFOD3Q6PK18 319 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 OR10J5Q8NHC4 309 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 MALSU1Q96EH3 234 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 TGIF2Q9GZN2 237 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 PRO3102Q9H379 93 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 SPACA1Q9HBV2 294 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 PADI1Q9ULC6 663 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 E9PLN8 166 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 RHEBQ15382 184 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 CARD17Q5XLA6 110 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 POC1BQ8TC44 478 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 CHST5Q9GZS9 411 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 PARP12Q9H0J9 701 aaKnown RBP17.07■□□□□ 0.32
HMG20B-213ENST00000488973 MCTS1Q9ULC4 181 aaKnown RBP17.07■□□□□ 0.32
HMG20B-213ENST00000488973 KCNIP3Q9Y2W7 256 aa17.07■□□□□ 0.32
HMG20B-213ENST00000488973 TMEM265A0A087WTH1 108 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 A0A1W2PPH5 198 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 M0R036 132 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 NME2P1O60361 137 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 QDPRP09417 244 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 HOXA5P20719 270 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 RPP30P78346 268 aaKnown RBP17.06■□□□□ 0.32
HMG20B-213ENST00000488973 ZNF616Q08AN1 781 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 CLN3Q13286 438 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 KRBOX4Q5JUW0 171 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 LCN10Q6JVE6 187 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 SHISA6Q6ZSJ9 500 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 THAP3Q8WTV1 239 aaPredicted RBP17.06■□□□□ 0.32
HMG20B-213ENST00000488973 PP6455Q8WZ26 134 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 LIN37Q96GY3 246 aaPredicted RBP17.06■□□□□ 0.32
HMG20B-213ENST00000488973 LYZL4Q96KX0 146 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 EIF5A2Q9GZV4 153 aaKnown RBP17.06■□□□□ 0.32
HMG20B-213ENST00000488973 LMAN1LQ9HAT1 526 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 PARPBPQ9NWS1 579 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 SCGB1D2O95969 90 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 IGFBP4P22692 258 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 S100A2P29034 98 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 P2RY1P47900 373 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 ZNF133P52736 654 aaPredicted RBP17.06■□□□□ 0.32
HMG20B-213ENST00000488973 SMAD4Q13485 552 aaKnown RBP17.06■□□□□ 0.32
HMG20B-213ENST00000488973 UBE2V2Q15819 145 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 GPR157Q5UAW9 335 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 NPRL2Q8WTW4 380 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 HAS2Q92819 552 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 RAB24Q969Q5 203 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 ISOC2Q96AB3 205 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 OXGR1Q96P68 337 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 OPN3Q9H1Y3 402 aaPredicted RBP17.06■□□□□ 0.32
HMG20B-213ENST00000488973 KLRF1Q9NZS2 232 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 STRAPQ9Y3F4 350 aaKnown RBP17.06■□□□□ 0.32
HMG20B-213ENST00000488973 V9GYS6 101 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 UNC13CQ8NB66 2214 aa17.06■□□□□ 0.32
HMG20B-213ENST00000488973 TOX3O15405 576 aaPredicted RBP17.05■□□□□ 0.32
HMG20B-213ENST00000488973 GPR137BO60478 399 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 DHRS3O75911 302 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 MBPP02686 304 aaPredicted RBP17.05■□□□□ 0.32
HMG20B-213ENST00000488973 FCGR2AP12318 317 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms