RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 TFF1P04155 84 aa11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 IL24Q13007 206 aa11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 CNN3Q15417 329 aaKnown RBP11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 ODF4Q2M2E3 257 aa11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 SLC25A30Q5SVS4 291 aa11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 KCTD20Q7Z5Y7 419 aa11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 Q8N7P7 452 aa11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 OR5D13Q8NGL4 314 aa11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 CYGBQ8WWM9 190 aa11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 MRPL48Q96GC5 212 aaKnown RBP11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 CHST5Q9GZS9 411 aa11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 SLITRK2Q9H156 845 aa11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 BEX1Q9HBH7 125 aa11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 MAB21L2Q9Y586 359 aa11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 GMPPBQ9Y5P6 360 aa11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 LOC100130705A0A1B0GUX0 176 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 LOC107986453A0A1B0GWG9 222 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 A6NIN4 97 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 RFPL4AA6NLU0 287 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 RFPL4AL1F8VTS6 287 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 H0YAE9 185 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 RNASEK-C17orf49H0YIS7 233 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 NPFFO15130 113 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 SPRY1O43609 319 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 NDUFA7O95182 113 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 PAHP00439 452 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 MDKP21741 143 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 UBE2E1P51965 193 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 FUT6P51993 359 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 RAG2P55895 527 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 ISL1P61371 349 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 SNRPGP62308 76 aaKnown RBP11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 ACSM1Q08AH1 577 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 OCLNQ16625 522 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 TMEM244Q5VVB8 128 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 IZUMO2Q6UXV1 221 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 GDPGP1Q6ZNW5 385 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 FAM185AQ8N0U4 392 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 TRMT10AQ8TBZ6 339 aaKnown RBP11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 PP6455Q8WZ26 134 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 RNFT2Q96EX2 444 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 ZNF488Q96MN9 340 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 NRIP2Q9BQI9 281 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 HES4Q9HCC6 221 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 FAM118AQ9NWS6 357 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 ZNRD1Q9P1U0 126 aa11.33□□□□□ -0.6
SPTLC1-207ENST00000488921 hCG_1809904A0A1W2PP81 198 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 A0A1W2PPE2 198 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 FAM230AA0A1W2PPH8 454 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 A0A1W2PR64 198 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 A0A1W2PRV1 198 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 DAPL1A0PJW8 107 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 MPZL2O60487 215 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 ENTPD6O75354 484 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 KNG1P01042 644 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 IGHV4-59P01825 116 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 PRDX2P32119 198 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 IER3P46695 156 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 ACTA2P62736 377 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 RPL31P62899 125 aaKnown RBP11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 ACTG2P63267 376 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 ZNF85Q03923 595 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 KLRD1Q13241 179 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 TP53I3Q53FA7 332 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 CALHM1Q8IU99 346 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 PRSS35Q8N3Z0 413 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 BORCS8Q96FH0 119 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 MBOAT4Q96T53 435 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 FAM234AQ9H0X4 552 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 Q9H521 79 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 ZNF696Q9H7X3 374 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 ELL3Q9HB65 397 aaPredicted RBP11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 C1RLQ9NZP8 487 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 OR14J1Q9UGF5 321 aa11.32□□□□□ -0.6
SPTLC1-207ENST00000488921 DSCAML1Q8TD84 2053 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 MEIOCA2RUB1 952 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 H3BSH0 61 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 SLC16A6O15403 523 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 GPR137BO60478 399 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 OMGP23515 440 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 SAA4P35542 130 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 CAPGP40121 348 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 AQP4P55087 323 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 ERVK11-1P61568 191 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 UBE2V2Q15819 145 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 PRR31Q5SQ13 230 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 C17orf107Q6ZR85 190 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 Q8IYB0 196 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 ACBD7Q8N6N7 88 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 CD177Q8N6Q3 437 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 SETD9Q8NE22 299 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 OR2G2Q8NGZ5 317 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 OR5R1Q8NH85 324 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 TNFRSF14Q92956 283 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 CEP19Q96LK0 163 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 Q96MT0 163 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 SF3B6Q9Y3B4 125 aaKnown RBP11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 NBEAL1Q6ZS30 2694 aa11.31□□□□□ -0.6
SPTLC1-207ENST00000488921 E9PQ18 207 aa11.3□□□□□ -0.6
SPTLC1-207ENST00000488921 J3QRE1 110 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms