RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 HPSE2Q8WWQ2 592 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 MUCL1Q96DR8 90 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 HIST1H2AAQ96QV6 131 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 C1QTNF6Q9BXI9 259 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 BCL2L14Q9BZR8 327 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 BANF2Q9H503 90 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 PCDHB16Q9NRJ7 776 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 COQ3Q9NZJ6 369 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 MRPL15Q9P015 296 aaKnown RBP10.89□□□□□ -0.67
NELFE-209ENST00000488426 GSTP1P09211 210 aaKnown RBP10.89□□□□□ -0.67
NELFE-209ENST00000488426 CSF1P09603 554 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 COX6B1P14854 86 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 SERPINA2P20848 420 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 CPT2P23786 658 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 CHRNB4P30926 498 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 PDZK1IP1Q13113 114 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 SNTB2Q13425 540 aaKnown RBP10.89□□□□□ -0.67
NELFE-209ENST00000488426 RSU1Q15404 277 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 SPATA46Q5T0L3 261 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 OLFML2AQ68BL7 652 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 CELF2-AS1Q8N7Q2 184 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 SLC25A40Q8TBP6 338 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 SEH1LQ96EE3 360 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 MRPS24Q96EL2 167 aaKnown RBP10.89□□□□□ -0.67
NELFE-209ENST00000488426 NICN1Q9BSH3 213 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 OR2J1Q9GZK6 312 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 ACTR6Q9GZN1 396 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 OR10A4Q9H209 315 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 ELL3Q9HB65 397 aaPredicted RBP10.89□□□□□ -0.67
NELFE-209ENST00000488426 JKAMPQ9P055 326 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 COPZ2Q9P299 210 aa10.89□□□□□ -0.67
NELFE-209ENST00000488426 ZNF107Q9UII5 783 aaPredicted RBP10.89□□□□□ -0.67
NELFE-209ENST00000488426 NOP16Q9Y3C1 178 aaKnown RBP10.89□□□□□ -0.67
NELFE-209ENST00000488426 A0A0A6YYD4 124 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 IGHV2OR16-5A0A0B4J2B6 119 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 A0A1W2PP11 408 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 OR5B21A6NL26 309 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 CSTBP04080 98 aaKnown RBP10.88□□□□□ -0.67
NELFE-209ENST00000488426 BTCP35070 178 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 RCVRNP35243 200 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 FAUP35544 74 aaKnown RBP10.88□□□□□ -0.67
NELFE-209ENST00000488426 IFITM2Q01629 132 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 ARL6IP1Q15041 203 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 PPA1Q15181 289 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 CDNFQ49AH0 187 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 PLA1AQ53H76 456 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 OR2T2Q6IF00 324 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 Q6ZTK2 550 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 SSX8Q7RTT4 187 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 SAXO1Q8IYX7 474 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 CHST4Q8NCG5 386 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 OR51T1Q8NGJ9 327 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 OR5P3Q8WZ94 311 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 CMBLQ96DG6 245 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 DPAGT1Q9H3H5 408 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 CRIM1Q9NZV1 1036 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 NLKQ9UBE8 527 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 VPS13CQ709C8 3753 aa10.88□□□□□ -0.67
NELFE-209ENST00000488426 TMEM235A6NFC5 223 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 IQCF6A8MYZ5 107 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 SPRY1O43609 319 aaPredicted RBP10.87□□□□□ -0.67
NELFE-209ENST00000488426 GTF2F2P13984 249 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 HIST1H1DP16402 221 aaKnown RBP10.87□□□□□ -0.67
NELFE-209ENST00000488426 IGFBP2P18065 325 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 GUCA2AQ02747 115 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 PCGF3Q3KNV8 242 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 MEX3BQ6ZN04 569 aaKnown RBP10.87□□□□□ -0.67
NELFE-209ENST00000488426 RELL2Q8NC24 303 aaPredicted RBP10.87□□□□□ -0.67
NELFE-209ENST00000488426 BHLHE23Q8NDY6 225 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 OR10K1Q8NGX5 313 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 CREB3L1Q96BA8 519 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 RAB3CQ96E17 227 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 MARS2Q96GW9 593 aaKnown RBP10.87□□□□□ -0.67
NELFE-209ENST00000488426 POM121Q96HA1 1249 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 MARVELD1Q9BSK0 173 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 SELENOIQ9C0D9 397 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 MMP28Q9H239 520 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 HRASLSQ9HDD0 168 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.87□□□□□ -0.67
NELFE-209ENST00000488426 FOXI3A8MTJ6 420 aaPredicted RBP10.87□□□□□ -0.67
NELFE-209ENST00000488426 SOCS1O15524 211 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 ANGPTL7O43827 346 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 GNG3P63215 75 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 NAAAQ02083 359 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 FAM27E3Q08E93 113 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 PNLIPRP3Q17RR3 467 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 TMEM200AQ86VY9 491 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 CADM3Q8N126 398 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 ZNF611Q8N823 705 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 KLF14Q8TD94 323 aaPredicted RBP10.87□□□□□ -0.67
NELFE-209ENST00000488426 Q96M66 194 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 FGF23Q9GZV9 251 aaPredicted RBP10.87□□□□□ -0.67
NELFE-209ENST00000488426 ZMAT3Q9HA38 289 aaKnown RBP10.87□□□□□ -0.67
NELFE-209ENST00000488426 KCNJ16Q9NPI9 418 aa10.87□□□□□ -0.67
NELFE-209ENST00000488426 IGKV1-12A0A0C4DH73 117 aa10.86□□□□□ -0.67
NELFE-209ENST00000488426 ZNF732B4DXR9 585 aa10.86□□□□□ -0.67
NELFE-209ENST00000488426 C16orf97H3BN30 126 aa10.86□□□□□ -0.67
NELFE-209ENST00000488426 MFNGO00587 321 aa10.86□□□□□ -0.67
NELFE-209ENST00000488426 AKR7A2O43488 359 aa10.86□□□□□ -0.67
NELFE-209ENST00000488426 HTR3BO95264 441 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms