RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 RPS15P62841 145 aaKnown RBP3.07□□□□□ -1.92
PTCD3-216ENST00000487043 PSPHP78330 225 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 CXCL6P80162 114 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 HPCAP84074 193 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 CD47Q08722 323 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 EBPQ15125 230 aaKnown RBP3.07□□□□□ -1.92
PTCD3-216ENST00000487043 ATP6AP1Q15904 470 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 ZNF141Q15928 474 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 TIMM50Q3ZCQ8 353 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 EIPR1Q53HC9 387 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 CCNJQ5T5M9 372 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 OGFRL1Q5TC84 451 aaPredicted RBP3.07□□□□□ -1.92
PTCD3-216ENST00000487043 PRAMEF20Q5VT98 475 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 SLC22A10Q63ZE4 541 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 LPCAT4Q643R3 524 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 OR5M10Q6IEU7 315 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 OR2T5Q6IEZ7 315 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 DHRS4L2Q6PKH6 230 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 C2orf66Q6UXQ4 117 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 GSG1LQ6UXU4 331 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 NPSR1Q6W5P4 371 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 HSDL2Q6YN16 418 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 NDUFAF7Q7L592 441 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 OLIG3Q7RTU3 272 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 H2BFWTQ7Z2G1 175 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 VTCN1Q7Z7D3 282 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 GALNT10Q86SR1 603 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 NRMQ8IXM6 262 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 APCDD1LQ8NCL9 501 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 SDR9C7Q8NEX9 313 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 GPR32P1Q8NGA4 272 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 OR52H1Q8NGJ2 320 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 OR1L6Q8NGR2 347 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 OR2T29Q8NH02 315 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 OR52P1PQ8NH57 321 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 NUBPLQ8TB37 319 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 FAM81AQ8TBF8 368 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 CT55Q8WUE5 264 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 CENPNQ96H22 339 aaPredicted RBP3.07□□□□□ -1.92
PTCD3-216ENST00000487043 IMMP1LQ96LU5 166 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 COL21A1Q96P44 957 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 TBX15Q96SF7 602 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 RNF2Q99496 336 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 SLITRK2Q9H156 845 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 TRIM45Q9H8W5 580 aaPredicted RBP3.07□□□□□ -1.92
PTCD3-216ENST00000487043 NTN4Q9HB63 628 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 AGPAT4Q9NRZ5 378 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 OR1A1Q9P1Q5 309 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 ZNF223Q9UK11 482 aaPredicted RBP3.07□□□□□ -1.92
PTCD3-216ENST00000487043 COPS3Q9UNS2 423 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 V9GYQ6 96 aa3.07□□□□□ -1.92
PTCD3-216ENST00000487043 IGHV1-45A0A0A0MS14 117 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 NSG1A0A0A6YYJ2 146 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 A0A1B0GWB2 263 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 G3V2T6 193 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 H0YJX3 145 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 hCG_2039718K7EN88 272 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 GNGT2O14610 69 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 ABCD4O14678 606 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 RAD1O60671 282 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 REM1O75628 298 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 UPK3AO75631 287 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 OXSR1O95747 527 aaPredicted RBP3.06□□□□□ -1.92
PTCD3-216ENST00000487043 IGKV1D-16P01601 117 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 IFNW1P05000 195 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 COX6A1P12074 109 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 ICAM2P13598 275 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 COX5AP20674 150 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 RPS4Y1P22090 263 aaKnown RBP3.06□□□□□ -1.92
PTCD3-216ENST00000487043 F8A1P23610 371 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 PEX19P40855 299 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 OR1E2P47887 323 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 RFX3P48380 749 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 PSMD7P51665 324 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 SLC25A1P53007 311 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 GK3PQ14409 553 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 FCN2Q15485 313 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 MAPK14Q16539 360 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 LRRC36Q1X8D7 754 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 LIN52Q52LA3 116 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 PAN3Q58A45 887 aaKnown RBP3.06□□□□□ -1.92
PTCD3-216ENST00000487043 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 RNASEKQ6P5S7 137 aaKnown RBP3.06□□□□□ -1.92
PTCD3-216ENST00000487043 METAP1DQ6UB28 335 aaPredicted RBP3.06□□□□□ -1.92
PTCD3-216ENST00000487043 C19orf35Q6ZS72 473 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 GVINP1Q7Z2Y8 2422 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 HMGN2P46Q86SG4 172 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 VRK2Q86Y07 508 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 MARCH9Q86YJ5 346 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 RBM45Q8IUH3 476 aaKnown RBP3.06□□□□□ -1.92
PTCD3-216ENST00000487043 SLC34A3Q8N130 599 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 CADM2Q8N3J6 435 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 SVOPLQ8N434 492 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 PACRGLQ8N7B6 248 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 OR11G2Q8NGC1 345 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 OR4D11Q8NGI4 311 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 OR56B4Q8NH76 319 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 OR5K1Q8NHB7 308 aa3.06□□□□□ -1.92
PTCD3-216ENST00000487043 GEMIN6Q8WXD5 167 aaKnown RBP3.06□□□□□ -1.92
PTCD3-216ENST00000487043 SLC35B4Q969S0 331 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms