RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 TBPL2Q6SJ96 375 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 ZNF730Q6ZMV8 503 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 GDPGP1Q6ZNW5 385 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 MBOAT2Q6ZWT7 520 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 RRM2BQ7LG56 351 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 ADCK1Q86TW2 530 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 MICU2Q8IYU8 434 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 ZSCAN4Q8NAM6 433 aaPredicted RBP3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 ADAD2Q8NCV1 583 aaKnown RBP3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 BHLHE23Q8NDY6 225 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 OR2T12Q8NG77 320 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 OR13C2Q8NGS9 318 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 NPRL2Q8WTW4 380 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 DYDC1Q8WWB3 177 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 TPD52L3Q96J77 140 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 ZNF570Q96NI8 536 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 WDFY2Q96P53 400 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 TBX15Q96SF7 602 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 GPX7Q96SL4 187 aaPredicted RBP3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 PCGF1Q9BSM1 259 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 SLC22A4Q9H015 551 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 SIRPDQ9H106 197 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 SYT4Q9H2B2 425 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 DPAGT1Q9H3H5 408 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 ANKRD19PQ9H560 264 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 C16orf95Q9H693 158 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 FN3KRPQ9HA64 309 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 TNFRSF19Q9NS68 423 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 SNTG1Q9NSN8 517 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 PTTG3PQ9NZH4 202 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 ERVK-18Q9QC07 812 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 RHCGQ9UBD6 479 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 TMCC3Q9ULS5 477 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 TMEM5Q9Y2B1 443 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 AP3M1Q9Y2T2 418 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 KCNK7Q9Y2U2 307 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 NOP16Q9Y3C1 178 aaKnown RBP3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 A0A087X002 238 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 TRAV38-1A0A0B4J264 116 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 A0A0G2JND7 137 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 IGHV3-64DA0A0J9YX35 117 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 ELOVL7A1L3X0 281 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 OOEPA6NGQ2 149 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 FAM220BPB1ANY3 271 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 F5H5K5 113 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 IMPA2O14732 288 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 MRASO14807 208 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 ARPC3O15145 178 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 ADAM20O43506 726 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 GMDSO60547 372 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 EDF1O60869 148 aaKnown RBP3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 TSPAN9O75954 239 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 LHBP01229 141 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 IGHV4-59P01825 116 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 ACSM4P0C7M7 580 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 TGFBR2P37173 567 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 MDH1P40925 334 aaKnown RBP3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 GPR4P46093 362 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 YAP1P46937 504 aaKnown RBP3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 ARF6P62330 175 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 MZT1Q08AG7 82 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 MAPRE2Q15555 327 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 OR8G1Q15617 311 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 MPPED2Q15777 294 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 SLC36A3Q495N2 470 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 CDONQ4KMG0 1287 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 IFI44LQ53G44 452 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 KPRPQ5T749 579 aaPredicted RBP3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 PRAMEF6Q5VXH4 476 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 OTPQ5XKR4 325 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 SLC35E4Q6ICL7 350 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 DNM1P34Q6PK57 102 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 CORO6Q6QEF8 472 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 METAP1DQ6UB28 335 aaPredicted RBP3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 DPY19L2P2Q6ZN68 376 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 PGAP1Q75T13 922 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 BTN2A1Q7KYR7 527 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 TSEN54Q7Z6J9 526 aaKnown RBP3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 VTCN1Q7Z7D3 282 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 NAA40Q86UY6 237 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 OR6V1Q8N148 313 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 SPERTQ8NA61 448 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 SCCPDHQ8NBX0 429 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 C19orf18Q8NEA5 215 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 SLC7A13Q8TCU3 470 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 SPRYD4Q8WW59 207 aaPredicted RBP3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 LHX4Q969G2 390 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 SLCO4A1Q96BD0 722 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 ATP6V1G3Q96LB4 118 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 TECTBQ96PL2 329 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 ATF6BQ99941 703 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 MMADHCQ9H3L0 296 aaPredicted RBP3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 RERGLQ9H628 205 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 WDR76Q9H967 626 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 UFSP2Q9NUQ7 469 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 INTS9Q9NV88 658 aaKnown RBP3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 GID8Q9NWU2 228 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 KAAG1Q9UBP8 84 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 CTSZQ9UBR2 303 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 CYB5R1Q9UHQ9 305 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms