RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SLAMF9Q96A28 289 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 FOXRED1Q96CU9 486 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-229ENST00000486665 DGCR14Q96DF8 476 aaKnown RBP10.76□□□□□ -0.69
HDAC6-229ENST00000486665 COX4I2Q96KJ9 171 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 UQCC2Q9BRT2 126 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 BARHL1Q9BZE3 327 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 PKIBQ9C010 78 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 FN3KRPQ9HA64 309 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 MTCH1Q9NZJ7 389 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 ING4Q9UNL4 249 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 PPP1R3CQ9UQK1 317 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 COL6A5A8TX70 2615 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 A0A0B4J203 849 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 IGHV1-69-2A0A0G2JMI3 117 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 IFITM5A6NNB3 132 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 NOTOA8MTQ0 251 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 H7C1Q1 480 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 SLC17A2O00624 439 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 SMAD7O15105 426 aaKnown RBP10.75□□□□□ -0.69
HDAC6-229ENST00000486665 SLC22A1O15245 554 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 NOL3O60936 208 aaKnown RBP10.75□□□□□ -0.69
HDAC6-229ENST00000486665 CYB5R3P00387 301 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-229ENST00000486665 DAOP14920 347 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 EGR1P18146 543 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 NPBWR2P48146 333 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 PTH2RP49190 550 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 CLDN12P56749 244 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 IL24Q13007 206 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 P2RY14Q15391 338 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 FAM201AQ5SY85 155 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 GLIPR1L1Q6UWM5 242 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 ASCL4Q6XD76 172 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 ZSCAN4Q8NAM6 433 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-229ENST00000486665 OR51F2Q8NH61 342 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 LRRC29Q8WV35 223 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 CCL17Q92583 94 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 RDH5Q92781 318 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 ERGIC1Q969X5 290 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 FAM192AQ9GZU8 254 aa10.75□□□□□ -0.69
HDAC6-229ENST00000486665 MRPS28Q9Y2Q9 187 aaKnown RBP10.75□□□□□ -0.69
HDAC6-229ENST00000486665 hCG_1807616A0A1W2PRN6 198 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 ZNF701M0R085 212 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-229ENST00000486665 WNT9BO14905 357 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 AKR7A2O43488 359 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 RP2O75695 350 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 LHBP01229 141 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 PGA5P0DJD9 388 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 CALCBP10092 127 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 BCL3P20749 454 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 HTR2CP28335 458 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 CFHR2P36980 270 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 ATP5J2P56134 94 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 GMFBP60983 142 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 RAB11BQ15907 218 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 SHEQ5VZ18 495 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 SFXN4Q6P4A7 337 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 MKXQ8IYA7 352 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 GCSAMQ8N6F7 178 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 BOLLQ8N9W6 283 aaKnown RBP10.74□□□□□ -0.69
HDAC6-229ENST00000486665 C19orf18Q8NEA5 215 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 PXT1Q8NFP0 134 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 OR6M1Q8NGM8 313 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 OR11L1Q8NGX0 322 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 OR10K1Q8NGX5 313 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 OR10Z1Q8NGY1 313 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 ZNF671Q8TAW3 534 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 SLC25A46Q96AG3 418 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 SEH1LQ96EE3 360 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 PERPQ96FX8 193 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 C1orf147Q96MC9 270 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-229ENST00000486665 Q96MF0 132 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 GSX2Q9BZM3 304 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 KCNK15Q9H427 330 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 PLGRKTQ9HBL7 147 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 BATF3Q9NR55 127 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 TMEM106BQ9NUM4 274 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 RNF7Q9UBF6 113 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 DAPK2Q9UIK4 370 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 ATRQ13535 2644 aa10.74□□□□□ -0.69
HDAC6-229ENST00000486665 USF3Q68DE3 2245 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 A0A1W2PP11 408 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 TMEM178BH3BS89 294 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-229ENST00000486665 AIPO00170 330 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 SSX4O60224 188 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 NOS1APO75052 506 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-229ENST00000486665 KDM4BO94953 1096 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 ZNF205O95201 554 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 SFTPBP07988 381 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 ACAA1P09110 424 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-229ENST00000486665 ERVK11-1P61568 191 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 MRPS11P82912 194 aaKnown RBP10.73□□□□□ -0.69
HDAC6-229ENST00000486665 PLA2G7Q13093 441 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 RIN1Q13671 783 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 ZNF181Q2M3W8 571 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 HFEQ30201 348 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 C2orf76Q3KRA6 126 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 IDNKQ5T6J7 187 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 AWAT2Q6E213 333 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 OR10K2Q6IF99 312 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms