RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 CHRAC1Q9NRG0 131 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 STX18Q9P2W9 335 aaKnown RBP1.77□□□□□ -2.13
LTN1-206ENST00000486427 RAB23Q9ULC3 237 aa1.77□□□□□ -2.13
LTN1-206ENST00000486427 NPHP4O75161 1426 aaPredicted RBP1.76□□□□□ -2.13
LTN1-206ENST00000486427 C2orf16Q68DN1 1984 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 ELP1O95163 1332 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 CENPXA8MT69 81 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 TRAPPC6AO75865 159 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 PAX6P26367 422 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 GNRHRP30968 328 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 ST3GAL4Q11206 333 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 TRDNQ13061 729 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 SPNS3Q6ZMD2 512 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 CYB561A3Q8NBI2 242 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 OR5T3Q8NGG3 340 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 FAM57AQ8TBR7 257 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 ZFAND1Q8TCF1 268 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 TFGQ92734 400 aaPredicted RBP1.76□□□□□ -2.13
LTN1-206ENST00000486427 KIR3DX1Q9H7L2 352 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 FAM60AQ9NP50 221 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 INIPQ9NRY2 104 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 TFR2Q9UP52 801 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 LOXHD1Q8IVV2 1947 aa1.76□□□□□ -2.13
LTN1-206ENST00000486427 IGKV1OR2-108A0A075B7D4 117 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 UPK1AO00322 258 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 OR4Q2P0C623 313 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 PRKACAP17612 351 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 RGS6P49758 472 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 BCAP31P51572 246 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 FOXA1P55317 472 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 MLF1P58340 268 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 IL5RAQ01344 420 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 ATP5G2Q06055 141 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 ADIGQ0VDE8 80 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 EPGNQ6UW88 154 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 ASCL4Q6XD76 172 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 VTCN1Q7Z7D3 282 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 LINC00523Q86TU6 105 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 FBXO36Q8NEA4 188 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 OR6K6Q8NGW6 343 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 ORAOV1Q8WV07 137 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 ITLN2Q8WWU7 325 aaPredicted RBP1.75□□□□□ -2.13
LTN1-206ENST00000486427 YIPF5Q969M3 257 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 YIPF6Q96EC8 236 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 DERL3Q96Q80 235 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 SPACA5Q96QH8 159 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 CHRNA10Q9GZZ6 450 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 RDH14Q9HBH5 336 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 RPRD1BQ9NQG5 326 aaKnown RBP1.75□□□□□ -2.13
LTN1-206ENST00000486427 ENPP4Q9Y6X5 453 aa1.75□□□□□ -2.13
LTN1-206ENST00000486427 COL11A1P12107 1806 aaPredicted RBP1.75□□□□□ -2.13
LTN1-206ENST00000486427 LOC100653049A0A140TA62 436 aa1.74□□□□□ -2.13
LTN1-206ENST00000486427 H3BQ85 93 aa1.74□□□□□ -2.13
LTN1-206ENST00000486427 NDUFS5O43920 106 aa1.74□□□□□ -2.13
LTN1-206ENST00000486427 KRT34O76011 436 aa1.74□□□□□ -2.13
LTN1-206ENST00000486427 SNAI1O95863 264 aaPredicted RBP1.74□□□□□ -2.13
LTN1-206ENST00000486427 IGHMP01871 453 aa1.74□□□□□ -2.13
LTN1-206ENST00000486427 TEAD1P28347 426 aa1.74□□□□□ -2.13
LTN1-206ENST00000486427 PSMC5P62195 406 aa1.74□□□□□ -2.13
LTN1-206ENST00000486427 SLC35B1P78383 322 aa1.74□□□□□ -2.13
LTN1-206ENST00000486427 MRPL2Q5T653 305 aaKnown RBP1.74□□□□□ -2.13
LTN1-206ENST00000486427 PAGE2Q7Z2X7 111 aa1.74□□□□□ -2.13
LTN1-206ENST00000486427 LINC00337Q8N6G1 96 aa1.74□□□□□ -2.13
LTN1-206ENST00000486427 PEBP4Q96S96 227 aa1.74□□□□□ -2.13
LTN1-206ENST00000486427 TSNAXQ99598 290 aaKnown RBP1.74□□□□□ -2.13
LTN1-206ENST00000486427 API5Q9BZZ5 524 aaKnown RBP1.74□□□□□ -2.13
LTN1-206ENST00000486427 FBXO44Q9H4M3 255 aa1.74□□□□□ -2.13
LTN1-206ENST00000486427 TDRD3Q9H7E2 651 aaKnown RBP1.74□□□□□ -2.13
LTN1-206ENST00000486427 BAZ1BQ9UIG0 1483 aaKnown RBP1.74□□□□□ -2.13
LTN1-206ENST00000486427 SSH2Q76I76 1423 aa1.74□□□□□ -2.13
LTN1-206ENST00000486427 SORL1Q92673 2214 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 OVOL1O14753 267 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 PLEKHA8P1O95397 391 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 HLA-GP17693 338 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 ATP6V1FQ16864 119 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 CDNFQ49AH0 187 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 TTC32Q5I0X7 151 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 ITPRIPQ8IWB1 547 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 OR51A7Q8NH64 312 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 ING5Q8WYH8 240 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 KIAA1143Q96AT1 154 aaPredicted RBP1.73□□□□□ -2.13
LTN1-206ENST00000486427 RNF170Q96K19 258 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 C20orf144Q9BQM9 153 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 PRO0628Q9UI54 55 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 CFL2Q9Y281 166 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 KPTNQ9Y664 436 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 KIF27Q86VH2 1401 aa1.73□□□□□ -2.13
LTN1-206ENST00000486427 A0A1W2PPV4 95 aa1.72□□□□□ -2.13
LTN1-206ENST00000486427 GMDSO60547 372 aa1.72□□□□□ -2.13
LTN1-206ENST00000486427 ETHE1O95571 254 aa1.72□□□□□ -2.13
LTN1-206ENST00000486427 CRYGCP07315 174 aa1.72□□□□□ -2.13
LTN1-206ENST00000486427 OR5AL1P0C617 328 aa1.72□□□□□ -2.13
LTN1-206ENST00000486427 SEC11BP0C7V7 166 aa1.72□□□□□ -2.13
LTN1-206ENST00000486427 PSMB2P49721 201 aa1.72□□□□□ -2.13
LTN1-206ENST00000486427 TAS2R60P59551 318 aa1.72□□□□□ -2.13
LTN1-206ENST00000486427 RPL31P62899 125 aaKnown RBP1.72□□□□□ -2.13
LTN1-206ENST00000486427 TOMM34Q15785 309 aaPredicted RBP1.72□□□□□ -2.13
LTN1-206ENST00000486427 FAM27D1Q5T7N8 215 aa1.72□□□□□ -2.13
LTN1-206ENST00000486427 KCTD16Q68DU8 428 aa1.72□□□□□ -2.13
LTN1-206ENST00000486427 C16orf87Q6PH81 154 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms