RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 LRP3O75074 770 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 CTAG2O75638 210 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 CRYBA1P05813 215 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 AKR1C3P42330 323 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 KIR2DS4P43632 304 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 SSTP61278 116 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 KIR2DS1Q14954 304 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 RAB35Q15286 201 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 FHL5Q5TD97 284 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 DRAM2Q6UX65 266 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 OR13C8Q8NGS7 320 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 OR10AC1Q8NH08 325 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 CMBLQ96DG6 245 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 ARHGEF17Q96PE2 2063 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-228ENST00000486227 VWA8A3KMH1 1905 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 A0A1W2PQM1 296 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 H3BMH7 237 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 HLA-HP01893 362 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 NFYBP25208 207 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 PTGER4P35408 488 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 DVL1P1P54792 670 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-228ENST00000486227 CSRP2Q16527 193 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 ZNF239Q16600 458 aaKnown RBP9.76□□□□□ -0.85
HDAC6-228ENST00000486227 TMEM128Q5BJH2 165 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 RPUSD3Q6P087 351 aaKnown RBP9.76□□□□□ -0.85
HDAC6-228ENST00000486227 DPPA2Q7Z7J5 298 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 ZDHHC23Q8IYP9 409 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 OR5T1Q8NG75 326 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 OR2M3Q8NG83 312 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 PRR7Q8TB68 274 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 SAT2Q96F10 170 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-228ENST00000486227 UCN2Q96RP3 112 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 SPP1P10451 314 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 HES1Q14469 280 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 RBMS3Q6XE24 437 aaKnown RBP9.76□□□□□ -0.85
HDAC6-228ENST00000486227 LGI3Q8N145 548 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 CISD2Q8N5K1 135 aaKnown RBP9.76□□□□□ -0.85
HDAC6-228ENST00000486227 OR52N4Q8NGI2 321 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 OR51H1Q8NH63 302 aa9.76□□□□□ -0.85
HDAC6-228ENST00000486227 SIRT4Q9Y6E7 314 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-228ENST00000486227 OR4C45A6NMZ5 311 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 HSD17B6O14756 317 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 TSPAN2O60636 221 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 TMIGD3P0DMS9 266 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-228ENST00000486227 CLINT1Q14677 625 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 KISS1Q15726 138 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 INPP5JQ15735 1006 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-228ENST00000486227 OR52W1Q6IF63 320 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 TSEN54Q7Z6J9 526 aaKnown RBP9.75□□□□□ -0.85
HDAC6-228ENST00000486227 LSRQ86X29 649 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-228ENST00000486227 ZNF573Q86YE8 665 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 MIOXQ9UGB7 285 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 PCDHGA9Q9Y5G4 932 aaKnown RBP9.75□□□□□ -0.85
HDAC6-228ENST00000486227 FAM74A7A6NL05 159 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 ST8SIA3O43173 380 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 OR5H8P0DN80 308 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 SNCAP37840 140 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 MGAT2Q10469 447 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 FAM74A3Q4VXF1 159 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 PDZD11Q5EBL8 140 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 PABPC1L2AQ5JQF8 200 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 SEH1LQ96EE3 360 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 FAM96BQ9Y3D0 163 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 POMT1Q9Y6A1 747 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 THSD7BQ9C0I4 1608 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 DOCK4Q8N1I0 1966 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 TMEM272A0A1B0GTI8 110 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 A0A1W2PR80 420 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 SIRPB1O00241 398 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 SCGB1D1O95968 90 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 DUSP1P28562 367 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 CALCRP30988 508 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 PDCD1Q15116 288 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 ARTNQ5T4W7 220 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 CLEC9AQ6UXN8 241 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 ARHGEF39Q8N4T4 335 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 RND1Q92730 232 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 APOBEC3DQ96AK3 386 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-228ENST00000486227 FGF2P09038 288 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 ANKRD34CP0C6C1 535 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 KCNJ3P48549 501 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 ZNF92Q03936 586 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 PPP1R1AQ13522 171 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 ZNF345Q14585 488 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 ZNF660Q6AZW8 331 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-228ENST00000486227 KCNIP4Q6PIL6 250 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 OR2G3Q8NGZ4 309 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 ZNF426Q9BUY5 554 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 FAM234AQ9H0X4 552 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 KCNK15Q9H427 330 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 ZNF355PQ9NSJ1 428 aa9.75□□□□□ -0.85
HDAC6-228ENST00000486227 AGFG2O95081 481 aa9.74□□□□□ -0.85
HDAC6-228ENST00000486227 CST4P01036 141 aa9.74□□□□□ -0.85
HDAC6-228ENST00000486227 H2AFB1P0C5Y9 115 aa9.74□□□□□ -0.85
HDAC6-228ENST00000486227 FUT6P51993 359 aa9.74□□□□□ -0.85
HDAC6-228ENST00000486227 OSR2Q8N2R0 312 aa9.74□□□□□ -0.85
HDAC6-228ENST00000486227 ARRDC1Q8N5I2 433 aa9.74□□□□□ -0.85
HDAC6-228ENST00000486227 OR10J5Q8NHC4 309 aa9.74□□□□□ -0.85
HDAC6-228ENST00000486227 BTF3L4Q96K17 158 aa9.74□□□□□ -0.85
HDAC6-228ENST00000486227 PLEKHA3Q9HB20 300 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms