RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 HOXA3O43365 443 aaPredicted RBP16.06■□□□□ 0.16
SNX5-213ENST00000486039 WBP4O75554 376 aaKnown RBP16.06■□□□□ 0.16
SNX5-213ENST00000486039 NXPH2O95156 264 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 FADS2O95864 444 aaKnown RBP16.06■□□□□ 0.16
SNX5-213ENST00000486039 SERPINA3P01011 423 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 HKR1P10072 659 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 PRDX2P32119 198 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 FUT6P51993 359 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 DLX1P56177 255 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 ACTA2P62736 377 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 ACTG2P63267 376 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 RAB40BQ12829 278 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 ALKBH1Q13686 389 aaKnown RBP16.06■□□□□ 0.16
SNX5-213ENST00000486039 LRRC36Q1X8D7 754 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 LPCAT4Q643R3 524 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 Q6YL49 198 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 CMTM4Q8IZR5 234 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 SYS1Q8N2H4 156 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 ZNF555Q8NEP9 628 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 OR52I1Q8NGK6 324 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 OR10AC1Q8NH08 325 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 ZDHHC16Q969W1 377 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 SIRT7Q9NRC8 400 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 ERVK13-1Q9NX77 482 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 MTCH1Q9NZJ7 389 aa16.06■□□□□ 0.16
SNX5-213ENST00000486039 RPL36Q9Y3U8 105 aaKnown RBP16.06■□□□□ 0.16
SNX5-213ENST00000486039 F8VVB4 439 aa16.05■□□□□ 0.16
SNX5-213ENST00000486039 F8VWA3 439 aa16.05■□□□□ 0.16
SNX5-213ENST00000486039 SPRY1O43609 319 aaPredicted RBP16.05■□□□□ 0.16
SNX5-213ENST00000486039 CLIC3O95833 236 aa16.05■□□□□ 0.16
SNX5-213ENST00000486039 SMN1Q16637 294 aaKnown RBP16.05■□□□□ 0.16
SNX5-213ENST00000486039 AWAT1Q58HT5 328 aa16.05■□□□□ 0.16
SNX5-213ENST00000486039 METAP1DQ6UB28 335 aaPredicted RBP16.05■□□□□ 0.16
SNX5-213ENST00000486039 PIP4P2Q8N4L2 257 aa16.05■□□□□ 0.16
SNX5-213ENST00000486039 OR51A4Q8NGJ6 313 aa16.05■□□□□ 0.16
SNX5-213ENST00000486039 SGMS2Q8NHU3 365 aa16.05■□□□□ 0.16
SNX5-213ENST00000486039 PP6455Q8WZ26 134 aa16.05■□□□□ 0.16
SNX5-213ENST00000486039 TNFRSF14Q92956 283 aa16.05■□□□□ 0.16
SNX5-213ENST00000486039 SLC25A28Q96A46 364 aa16.05■□□□□ 0.16
SNX5-213ENST00000486039 FGGYQ96C11 551 aa16.05■□□□□ 0.16
SNX5-213ENST00000486039 BORCS8Q96FH0 119 aa16.05■□□□□ 0.16
SNX5-213ENST00000486039 NOX4Q9NPH5 578 aa16.05■□□□□ 0.16
SNX5-213ENST00000486039 INPP5EQ9NRR6 644 aa16.05■□□□□ 0.16
SNX5-213ENST00000486039 A0A1W2PQ09 198 aa16.04■□□□□ 0.16
SNX5-213ENST00000486039 E9PI62 339 aa16.04■□□□□ 0.16
SNX5-213ENST00000486039 CAPZA1P52907 286 aa16.04■□□□□ 0.16
SNX5-213ENST00000486039 CNN3Q15417 329 aaKnown RBP16.04■□□□□ 0.16
SNX5-213ENST00000486039 ZNF691Q5VV52 312 aa16.04■□□□□ 0.16
SNX5-213ENST00000486039 C1orf122Q6ZSJ8 110 aa16.04■□□□□ 0.16
SNX5-213ENST00000486039 EGFL6Q8IUX8 553 aa16.04■□□□□ 0.16
SNX5-213ENST00000486039 ZNF561Q8N587 486 aa16.04■□□□□ 0.16
SNX5-213ENST00000486039 TAF15Q92804 592 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNX5-213ENST00000486039 SLAMF9Q96A28 289 aa16.04■□□□□ 0.16
SNX5-213ENST00000486039 MRPL48Q96GC5 212 aaKnown RBP16.04■□□□□ 0.16
SNX5-213ENST00000486039 C19orf12Q9NSK7 152 aa16.04■□□□□ 0.16
SNX5-213ENST00000486039 OR14J1Q9UGF5 321 aa16.04■□□□□ 0.16
SNX5-213ENST00000486039 HHLA2Q9UM44 414 aa16.04■□□□□ 0.16
SNX5-213ENST00000486039 TRBV23-1A0A0A0MS06 115 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 A0A0U1RQK1 487 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 RNASEK-C17orf49H0YIS7 233 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 M0R1W7 72 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 SLC1A7O00341 560 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 INMTO95050 263 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 KNG1P01042 644 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 MELTFP08582 738 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 ATF1P18846 271 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 PEX2P28328 305 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 KLRD1Q13241 179 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 RCN1Q15293 331 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 KLHL22Q53GT1 634 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 C16orf87Q6PH81 154 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 SLC25A26Q70HW3 274 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 UTS2BQ765I0 119 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 DNAAF1Q8NEP3 725 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 CEP19Q96LK0 163 aa16.03■□□□□ 0.16
SNX5-213ENST00000486039 MYCBPQ99417 103 aaPredicted RBP16.03■□□□□ 0.16
SNX5-213ENST00000486039 ANKRD65E5RJM6 399 aa16.02■□□□□ 0.16
SNX5-213ENST00000486039 LIMS3P0CW19 117 aa16.02■□□□□ 0.16
SNX5-213ENST00000486039 LIMS4P0CW20 117 aa16.02■□□□□ 0.16
SNX5-213ENST00000486039 ZNF20P17024 532 aa16.02■□□□□ 0.16
SNX5-213ENST00000486039 AZGP1P25311 298 aaKnown RBP16.02■□□□□ 0.16
SNX5-213ENST00000486039 RBP2P50120 134 aa16.02■□□□□ 0.16
SNX5-213ENST00000486039 ATP1B3P54709 279 aa16.02■□□□□ 0.16
SNX5-213ENST00000486039 FOXL1Q12952 345 aa16.02■□□□□ 0.16
SNX5-213ENST00000486039 FAM185AQ8N0U4 392 aa16.02■□□□□ 0.16
SNX5-213ENST00000486039 ZNF676Q8N7Q3 588 aa16.02■□□□□ 0.16
SNX5-213ENST00000486039 CNIH3Q8TBE1 160 aa16.02■□□□□ 0.16
SNX5-213ENST00000486039 UNKLQ9H9P5 680 aaKnown RBP16.02■□□□□ 0.16
SNX5-213ENST00000486039 FGF20Q9NP95 211 aaPredicted RBP16.02■□□□□ 0.16
SNX5-213ENST00000486039 TNFRSF19Q9NS68 423 aa16.02■□□□□ 0.16
SNX5-213ENST00000486039 ZFPL1O95159 310 aa16.01■□□□□ 0.15
SNX5-213ENST00000486039 TK1P04183 234 aa16.01■□□□□ 0.15
SNX5-213ENST00000486039 MTCP1P56278 107 aa16.01■□□□□ 0.15
SNX5-213ENST00000486039 ADARB1P78563 741 aaKnown RBP16.01■□□□□ 0.15
SNX5-213ENST00000486039 COL10A1Q03692 680 aa16.01■□□□□ 0.15
SNX5-213ENST00000486039 RNF144BQ7Z419 303 aa16.01■□□□□ 0.15
SNX5-213ENST00000486039 PACRGLQ8N7B6 248 aa16.01■□□□□ 0.15
SNX5-213ENST00000486039 OR4M1Q8NGD0 313 aa16.01■□□□□ 0.15
SNX5-213ENST00000486039 OR13C3Q8NGS6 347 aa16.01■□□□□ 0.15
SNX5-213ENST00000486039 CYGBQ8WWM9 190 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms