RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 H3BSA7 217 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 CCL24O00175 119 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 COPEO14579 308 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 NDUFS7O75251 213 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 EEDO75530 441 aaKnown RBP3.82□□□□□ -1.8
RTN4-213ENST00000485749 RFPL2O75678 378 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 GAGE7O76087 117 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 DBIP07108 87 aaKnown RBP3.82□□□□□ -1.8
RTN4-213ENST00000485749 H1F0P07305 194 aaKnown RBP3.82□□□□□ -1.8
RTN4-213ENST00000485749 SP1P08047 785 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 TACSTD2P09758 323 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 UBBP0CG47 229 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 GAGE12FP0CL80 117 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 GAGE12GP0CL81 117 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 GAGE12IP0CL82 117 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 BCKDHAP12694 445 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 KIR2DS4P43632 304 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 XGP55808 180 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 DLX1P56177 255 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 ISL1P61371 349 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 TFF2Q03403 129 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 GAGE4Q13068 117 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 GTF2H2Q13888 395 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 TAB1Q15750 504 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 ZNF239Q16600 458 aaKnown RBP3.82□□□□□ -1.8
RTN4-213ENST00000485749 LTC4SQ16873 150 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 LRRC37A5PQ49AS3 106 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 FNBP1LQ5T0N5 605 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 AKR1C8PQ5T2L2 129 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 FAM27D1Q5T7N8 215 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 LAMTOR1Q6IAA8 161 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 GTF2H2CQ6P1K8 395 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 ZNF613Q6PF04 617 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 WDR59Q6PJI9 974 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 TBPL2Q6SJ96 375 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 ATRAIDQ6UW56 229 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 ZNF793Q6ZN11 406 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 IFNEQ86WN2 208 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 DND1Q8IYX4 353 aaKnown RBP3.82□□□□□ -1.8
RTN4-213ENST00000485749 MUC15Q8N387 334 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 ZADH2Q8N4Q0 377 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 FAM24BQ8N5W8 94 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 ACBD7Q8N6N7 88 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 UBAC2Q8NBM4 344 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 OR4K17Q8NGC6 315 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 OR51S1Q8NGJ8 323 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 OR10G4Q8NGN3 311 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 OR5M9Q8NGP3 310 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 C16orf52Q8NHV5 167 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 SPPL2BQ8TCT7 592 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 RNF138Q8WVD3 245 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 CANT1Q8WVQ1 401 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 CMBLQ96DG6 245 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 AURKBQ96GD4 344 aaPredicted RBP3.82□□□□□ -1.8
RTN4-213ENST00000485749 DIRAS2Q96HU8 199 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 OR7D2Q96RA2 312 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 NODALQ96S42 347 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 SYT15Q9BQS2 421 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 URM1Q9BTM9 101 aaKnown RBP3.82□□□□□ -1.8
RTN4-213ENST00000485749 EFCAB11Q9BUY7 163 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 VN1R1Q9GZP7 353 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 TMEM126AQ9H061 195 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 MS4A6AQ9H2W1 248 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 EFCAB1Q9HAE3 211 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 ACKR4Q9NPB9 350 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 A4GALTQ9NPC4 353 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 KCNJ16Q9NPI9 418 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 IL36AQ9UHA7 158 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 ZNF230Q9UIE0 474 aaPredicted RBP3.82□□□□□ -1.8
RTN4-213ENST00000485749 STUB1Q9UNE7 303 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 PSG8Q9UQ74 426 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 SCML2Q9UQR0 700 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 ADAMTS7Q9UKP4 1686 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 A0A087WUJ7 227 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 BORCS7-ASMTA0A0B4J1R7 106 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 TRBV4-1A0A0J9YWV2 114 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 A0A0X1KG70 313 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 EXOC1LA0A1B0GW35 172 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 TRAPPC13A5PLN9 417 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 NKX2-6A6NCS4 301 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 OR5B21A6NL26 309 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 LYRM9A8MSI8 78 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 BTNL10A8MVZ5 291 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 TRIM49D1C9J1S8 452 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 ZNF593O00488 134 aaPredicted RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 MFNGO00587 321 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 GAPDHSO14556 408 aaPredicted RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 DEGS1O15121 323 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 PPIHO43447 177 aaKnown RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 MBTPS2O43462 519 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 GALR3O60755 368 aaPredicted RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 SPAG7O75391 227 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 KLF8O95600 359 aaPredicted RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 CDS2O95674 445 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 GLUD1P00367 558 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 APOHP02749 345 aaPredicted RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 FGF2P09038 288 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 CD79AP11912 226 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 CD99P14209 185 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 MUC1P15941 1255 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms