RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 C1orf87Q8N0U7 546 aa14.79□□□□□ -0.04
CHMP3-207ENST00000485465 GCSAMQ8N6F7 178 aa14.79□□□□□ -0.04
CHMP3-207ENST00000485465 TBC1D15Q8TC07 691 aa14.79□□□□□ -0.04
CHMP3-207ENST00000485465 NRIP2Q9BQI9 281 aa14.79□□□□□ -0.04
CHMP3-207ENST00000485465 BARHL1Q9BZE3 327 aa14.79□□□□□ -0.04
CHMP3-207ENST00000485465 ELL3Q9HB65 397 aaPredicted RBP14.79□□□□□ -0.04
CHMP3-207ENST00000485465 MYOZ1Q9NP98 299 aaPredicted RBP14.79□□□□□ -0.04
CHMP3-207ENST00000485465 IL36GQ9NZH8 169 aa14.79□□□□□ -0.04
CHMP3-207ENST00000485465 GHRLQ9UBU3 117 aa14.79□□□□□ -0.04
CHMP3-207ENST00000485465 DAPK2Q9UIK4 370 aa14.79□□□□□ -0.04
CHMP3-207ENST00000485465 APCP25054 2843 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 SRRM5B3KS81 715 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 C3orf80F5H4A9 247 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 F8VVB4 439 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 F8VWA3 439 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 WNT9BO14905 357 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 BPNT1O95861 308 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 UBBP0CG47 229 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 EGR1P18146 543 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 HOXA4Q00056 320 aaPredicted RBP14.78□□□□□ -0.04
CHMP3-207ENST00000485465 IDNKQ5T6J7 187 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 CDH24Q86UP0 819 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 Q8IYB0 196 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 BATF2Q8N1L9 274 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 BOLLQ8N9W6 283 aaKnown RBP14.78□□□□□ -0.04
CHMP3-207ENST00000485465 OR10K1Q8NGX5 313 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 DYNC2LI1Q8TCX1 351 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 FAM3DQ96BQ1 224 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 C1orf147Q96MC9 270 aaPredicted RBP14.78□□□□□ -0.04
CHMP3-207ENST00000485465 CHODLQ9H9P2 273 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 RASL12Q9NYN1 266 aa14.78□□□□□ -0.04
CHMP3-207ENST00000485465 A0A0B4J203 849 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 TMEM127O75204 238 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 ZNF780AO75290 641 aaPredicted RBP14.77□□□□□ -0.05
CHMP3-207ENST00000485465 SFTPBP07988 381 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 ARSBP15848 533 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 GLRA1P23415 457 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 GMFBP60983 142 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 GPR176Q14439 515 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 DGUOKQ16854 277 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 C2orf76Q3KRA6 126 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 SLC22A6Q4U2R8 563 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 FAM201AQ5SY85 155 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 LRRC75A-AS1Q8N1F1 130 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 ZNF525Q8N782 197 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 Q8NFD4 153 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 OR51D1Q8NGF3 324 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 WDR13Q9H1Z4 485 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 LIN7BQ9HAP6 207 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 RHOFQ9HBH0 211 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 HES4Q9HCC6 221 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 PCDHB16Q9NRJ7 776 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 RBFOX1Q9NWB1 397 aaKnown RBP14.77□□□□□ -0.05
CHMP3-207ENST00000485465 NPTNQ9Y639 398 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 UNC79Q9P2D8 2635 aa14.77□□□□□ -0.05
CHMP3-207ENST00000485465 CHD3Q12873 2000 aaKnown RBP14.76□□□□□ -0.05
CHMP3-207ENST00000485465 CLDN25C9JDP6 229 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.76□□□□□ -0.05
CHMP3-207ENST00000485465 NXPH2O95156 264 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 HTR3BO95264 441 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 VSIG8P0DPA2 414 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 ZNF182P17025 639 aaPredicted RBP14.76□□□□□ -0.05
CHMP3-207ENST00000485465 CD80P33681 288 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 SOX6P35712 828 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 PDLIM4P50479 330 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 CAPZA1P52907 286 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 TMEM33P57088 247 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 QRFPP83859 136 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 CARTPTQ16568 116 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 ELP2Q6IA86 826 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 FAM58AQ8N1B3 248 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 EMG1Q92979 244 aaKnown RBP14.76□□□□□ -0.05
CHMP3-207ENST00000485465 KCNK15Q9H427 330 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 HMG20AQ9NP66 347 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 CCDC59Q9P031 241 aaKnown RBP14.76□□□□□ -0.05
CHMP3-207ENST00000485465 DYSFO75923 2080 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 AKAP6Q13023 2319 aa14.76□□□□□ -0.05
CHMP3-207ENST00000485465 TANC2Q9HCD6 1990 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 PPIAL4EA0A075B759 164 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 PPIAL4DF5H284 164 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 ZNF205O95201 554 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 CSTBP04080 98 aaKnown RBP14.75□□□□□ -0.05
CHMP3-207ENST00000485465 PPIAL4FP0DN26 164 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 CALCBP10092 127 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 SNRPBP14678 240 aaKnown RBP14.75□□□□□ -0.05
CHMP3-207ENST00000485465 SERPINA2P20848 420 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 BMXP51813 675 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 OR10K2Q6IF99 312 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 ACP7Q6ZNF0 438 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 PEG10Q86TG7 708 aaKnown RBP14.75□□□□□ -0.05
CHMP3-207ENST00000485465 C19orf18Q8NEA5 215 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 KCNG3Q8TAE7 436 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 KCTD12Q96CX2 325 aaKnown RBP14.75□□□□□ -0.05
CHMP3-207ENST00000485465 SEH1LQ96EE3 360 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 DCUN1D5Q9BTE7 237 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 MRI1Q9BV20 369 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 ABRACLQ9P1F3 81 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 OR5V1Q9UGF6 321 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 PPIAL4AQ9Y536 164 aa14.75□□□□□ -0.05
CHMP3-207ENST00000485465 USF3Q68DE3 2245 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms