RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	CEBPD	P49716	269 aa	Predicted RBP	10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	ODF4	Q2M2E3	257 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	FAHD1	Q6P587	224 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	C11orf88	Q6PI97	169 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	PLEKHG7	Q6ZR37	379 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	KRT74	Q7RTS7	529 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	ELMOD2	Q8IZ81	293 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	BATF2	Q8N1L9	274 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	CD177	Q8N6Q3	437 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	ASCC1	Q8N9N2	400 aa	Known RBP	10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	OR4M1	Q8NGD0	313 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	TRMT10A	Q8TBZ6	339 aa	Known RBP	10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	TMEM163	Q8TC26	289 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	PPP1R14A	Q96A00	147 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	TBX5	Q99593	518 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	CLN6	Q9NWW5	311 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	FBLN5	Q9UBX5	448 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424		V9GYS6	101 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	KIAA2026	Q5HYC2	2103 aa		10.79	□□□□□ -0.68
UBA3-210	ENST00000485424		A6NIN4	97 aa		10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	MAGEB4	O15481	346 aa	Predicted RBP	10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	PIP	P12273	146 aa	Predicted RBP	10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	COX7A1	P24310	79 aa		10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	HERPUD1	Q15011	391 aa		10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	GDPD3	Q7L5L3	318 aa		10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	BCDIN3D	Q7Z5W3	292 aa	Known RBP	10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	ZDHHC13	Q8IUH4	622 aa		10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	OR14K1	Q8NGZ2	314 aa		10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	RORB	Q92753	470 aa		10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	IL4I1	Q96RQ9	567 aa		10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	NKX3-1	Q99801	234 aa	Predicted RBP	10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	NPFFR1	Q9GZQ6	430 aa		10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	MEGF9	Q9H1U4	602 aa		10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	ADGRL4	Q9HBW9	690 aa		10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	ABCB10	Q9NRK6	738 aa		10.79	□□□□□ -0.68
UBA3-210	ENST00000485424	PQLC2L	A1A4F0	135 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	DHRS7C	A6NNS2	312 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	PRR32	B1ATL7	298 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424		M0R129	80 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	SYT7	O43581	403 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	NOS1AP	O75052	506 aa	Predicted RBP	10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	PEX14	O75381	377 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	GATB	O75879	557 aa	Known RBP	10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	SERPINA3	P01011	423 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	TK1	P04183	234 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	CCL3L1	P16619	93 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	FAS	P25445	335 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	RASSF2	P50749	326 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	BMX	P51813	675 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	EDDM3B	P56851	147 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	AANAT	Q16613	207 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	SLX4IP	Q5VYV7	408 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	TMEM200B	Q69YZ2	307 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	ZNF782	Q6ZMW2	699 aa	Predicted RBP	10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	FAM220A	Q7Z4H9	259 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	CALHM1	Q8IU99	346 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	OR13D1	Q8NGV5	346 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	C17orf50	Q8WW18	174 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	PKIB	Q9C010	78 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	RANBP3	Q9H6Z4	567 aa	Predicted RBP	10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	WARS2	Q9UGM6	360 aa	Known RBP	10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	SLC22A13	Q9Y226	551 aa		10.78	□□□□□ -0.68
UBA3-210	ENST00000485424	ZAR1L	A6NP61	321 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424		H3BSH0	61 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	MITF	O75030	526 aa	Predicted RBP	10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	SRSF10	O75494	262 aa	Known RBP	10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	CYB5A	P00167	134 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	ARG1	P05089	322 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	CHRM2	P08172	466 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	OR2T7	P0C7T2	308 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	VSIG10L2	P0DP72	767 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	FCGR1A	P12314	374 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	COL10A1	Q03692	680 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	IL24	Q13007	206 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	ATP6AP1	Q15904	470 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	PLA1A	Q53H76	456 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	AADACL4	Q5VUY2	407 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	TMEM42	Q69YG0	159 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	C12orf73	Q69YU5	71 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	HCP5	Q6MZN7	132 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	ANGPTL5	Q86XS5	388 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	CCDC54	Q8NEL0	328 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	OR10H4	Q8NGA5	316 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	UTP4	Q969X6	686 aa	Known RBP	10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	FOXRED1	Q96CU9	486 aa	Predicted RBP	10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	BORCS8	Q96FH0	119 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	CEP19	Q96LK0	163 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	NRIP2	Q9BQI9	281 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	MRM2	Q9UI43	246 aa	Known RBP	10.77	□□□□□ -0.69
UBA3-210	ENST00000485424	NBEAL2	Q6ZNJ1	2754 aa		10.77	□□□□□ -0.69
UBA3-210	ENST00000485424		H3BUI4	141 aa		10.76	□□□□□ -0.69
UBA3-210	ENST00000485424	DYNC1I1	O14576	645 aa		10.76	□□□□□ -0.69
UBA3-210	ENST00000485424	INMT	O95050	263 aa		10.76	□□□□□ -0.69
UBA3-210	ENST00000485424	OCM2	P0CE71	109 aa		10.76	□□□□□ -0.69
UBA3-210	ENST00000485424	OCM	P0CE72	109 aa	Predicted RBP	10.76	□□□□□ -0.69
UBA3-210	ENST00000485424	KIR2DS4	P43632	304 aa		10.76	□□□□□ -0.69
UBA3-210	ENST00000485424	SMCP	P49901	116 aa	Predicted RBP	10.76	□□□□□ -0.69
UBA3-210	ENST00000485424	FUT6	P51993	359 aa		10.76	□□□□□ -0.69

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