RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 GCLMP48507 274 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 ZNF133P52736 654 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-211ENST00000484581 SLC18A1P54219 525 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 EMP2P54851 167 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 BAXQ07812 192 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 FBXL19-AS1Q494R0 122 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 RNASE13Q5GAN3 156 aaKnown RBP2.92□□□□□ -1.94
VPS13A-211ENST00000484581 TIMM23BQ5SRD1 257 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 WDR86Q86TI4 376 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 PLCZ1Q86YW0 608 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 RNF10Q8N5U6 811 aaKnown RBP2.92□□□□□ -1.94
VPS13A-211ENST00000484581 ZNF645Q8N7E2 425 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 CCNYL1Q8N7R7 359 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 OR4K2Q8NGD2 314 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 RNASEH2CQ8TDP1 164 aaKnown RBP2.92□□□□□ -1.94
VPS13A-211ENST00000484581 NELFBQ8WX92 580 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 C18orf15Q96N68 181 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 BIRC8Q96P09 236 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 QKIQ96PU8 341 aaKnown RBP eCLIP2.92□□□□□ -1.94
VPS13A-211ENST00000484581 SLC17A9Q9BYT1 436 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 LHX5Q9H2C1 402 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 C8orf17Q9NRJ1 99 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 TBX21Q9UL17 535 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 RAB22AQ9UL26 194 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 ENPP4Q9Y6X5 453 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 GPATCH8Q9UKJ3 1502 aaKnown RBP2.92□□□□□ -1.94
VPS13A-211ENST00000484581 RAD50Q92878 1312 aa2.92□□□□□ -1.94
VPS13A-211ENST00000484581 SIGLEC1Q9BZZ2 1709 aa2.91□□□□□ -1.94
VPS13A-211ENST00000484581 AQP9O43315 295 aa2.91□□□□□ -1.94
VPS13A-211ENST00000484581 IL3RAP26951 378 aa2.91□□□□□ -1.94
VPS13A-211ENST00000484581 KRTAP10-8P60410 259 aa2.91□□□□□ -1.94
VPS13A-211ENST00000484581 GRB2P62993 217 aaKnown RBP2.91□□□□□ -1.94
VPS13A-211ENST00000484581 DEFB116Q30KQ4 102 aa2.91□□□□□ -1.94
VPS13A-211ENST00000484581 SLC25A35Q3KQZ1 300 aa2.91□□□□□ -1.94
VPS13A-211ENST00000484581 OR4M2Q8NGB6 313 aa2.91□□□□□ -1.94
VPS13A-211ENST00000484581 FAM45AQ8TCE6 357 aa2.91□□□□□ -1.94
VPS13A-211ENST00000484581 DYNC2LI1Q8TCX1 351 aa2.91□□□□□ -1.94
VPS13A-211ENST00000484581 SPACA5Q96QH8 159 aa2.91□□□□□ -1.94
VPS13A-211ENST00000484581 ASCL3Q9NQ33 180 aa2.91□□□□□ -1.94
VPS13A-211ENST00000484581 IMP3Q9NV31 184 aaKnown RBP2.91□□□□□ -1.94
VPS13A-211ENST00000484581 RBM22Q9NW64 420 aaKnown RBP eCLIP2.91□□□□□ -1.94
VPS13A-211ENST00000484581 NKIRAS1Q9NYS0 192 aa2.91□□□□□ -1.94
VPS13A-211ENST00000484581 PCM1Q15154 2024 aa2.9□□□□□ -1.94
VPS13A-211ENST00000484581 IGLV4-69A0A075B6H9 119 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 A0A1W2PRG6 482 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 C5orf63A6NC05 138 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 RBFOX3A6NFN3 312 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 GOLGA6L10A6NI86 522 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 OR2AT4A6NND4 320 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 CENPBD1B2RD01 187 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 KLRC4-KLRK1H3BQV0 150 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 UPK2O00526 184 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 PLIN3O60664 434 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 HLA-DQA1P01909 254 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 RLN2P04090 185 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 LIMS3P0CW19 117 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 LIMS4P0CW20 117 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 PET100P0DJ07 73 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 ZNF35P13682 527 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 ME2P23368 584 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 RHOAP61586 193 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 RPL10AP62906 217 aaKnown RBP2.9□□□□□ -1.95
VPS13A-211ENST00000484581 UBE2IP63279 158 aaKnown RBP2.9□□□□□ -1.95
VPS13A-211ENST00000484581 ZNHIT3Q15649 155 aaPredicted RBP2.9□□□□□ -1.95
VPS13A-211ENST00000484581 TEX30Q5JUR7 227 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 SAXO2Q658L1 398 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 TMEM256Q8N2U0 113 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 ZNF786Q8N393 782 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 CYB561D1Q8N8Q1 229 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 ATP6V1C2Q8NEY4 427 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 OR2M7Q8NG81 312 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 BLNKQ8WV28 456 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 SRSF12Q8WXF0 261 aaKnown RBP2.9□□□□□ -1.95
VPS13A-211ENST00000484581 PPWD1Q96BP3 646 aaKnown RBP2.9□□□□□ -1.95
VPS13A-211ENST00000484581 WDR34Q96EX3 536 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 SMIM8Q96KF7 97 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 PITX2Q99697 317 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 APOL4Q9BPW4 351 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 NDFIP1Q9BT67 221 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 CHCHD7Q9BUK0 85 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 NUDT9Q9BW91 350 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 WFDC1Q9HC57 220 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 EXOSC4Q9NPD3 245 aaKnown RBP2.9□□□□□ -1.95
VPS13A-211ENST00000484581 DIABLOQ9NR28 239 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 SDHAF3Q9NRP4 125 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 ZNF355PQ9NSJ1 428 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 ELP1O95163 1332 aa2.9□□□□□ -1.95
VPS13A-211ENST00000484581 NACAE9PAV3 2078 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 A0A0A6YYH2 397 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 A6NJ64 397 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 PRAMEF26H0Y7S4 382 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 ZNF207O43670 478 aaKnown RBP2.89□□□□□ -1.95
VPS13A-211ENST00000484581 IGLV3-25P01717 112 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 CDK1P06493 297 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 OR4Q2P0C623 313 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 C1GALT1C1LP0DN25 315 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 PSMB9P28065 219 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 TSPOP30536 169 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 ATRXP46100 2492 aa2.89□□□□□ -1.95
VPS13A-211ENST00000484581 CXCL12P48061 93 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms