RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 OR51B6Q9H340 312 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 LUZP4Q9P127 313 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 GPR160Q9UJ42 338 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 ANAPC10Q9UM13 185 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 A0A1W2PR80 420 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 RNF222A6NCQ9 220 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 ANGPTL7O43827 346 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 CDC14BO60729 498 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 PMP2P02689 132 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 FCGR2AP12318 317 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 EDN3P14138 238 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 HIST1H1DP16402 221 aaKnown RBP12.53□□□□□ -0.4
CHD3-211ENST00000481999 AKR1C4P17516 323 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 LUMP51884 338 aaPredicted RBP12.53□□□□□ -0.4
CHD3-211ENST00000481999 RRADP55042 308 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 PLAC9Q5JTB6 97 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 CASTOR1Q8WTX7 329 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 CRIM1Q9NZV1 1036 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 A0A0U1RQV5 110 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 TEX46H3BTG2 121 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 LGALS8O00214 317 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 CRTAPO75718 401 aaPredicted RBP12.53□□□□□ -0.4
CHD3-211ENST00000481999 NAT1P18440 290 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 SERPINA2P20848 420 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 CD82P27701 267 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 SCRN3Q0VDG4 424 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 HIKESHIQ53FT3 197 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 VAX1Q5SQQ9 334 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 PXDC1Q5TGL8 231 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 ARRDC1Q8N5I2 433 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 ADAD2Q8NCV1 583 aaKnown RBP12.53□□□□□ -0.4
CHD3-211ENST00000481999 TERB2Q8NHR7 220 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 SSC4DQ8WTU2 575 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 FBXW5Q969U6 566 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 ZNF471Q9BX82 626 aaPredicted RBP12.53□□□□□ -0.4
CHD3-211ENST00000481999 TMEM59Q9BXS4 323 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 WDR13Q9H1Z4 485 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 TIMM10BQ9Y5J6 103 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 V9GYS6 101 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 IGF2RP11717 2491 aa12.53□□□□□ -0.4
CHD3-211ENST00000481999 IGKV1-27A0A075B6S5 117 aa12.52□□□□□ -0.4
CHD3-211ENST00000481999 SPRY1O43609 319 aaPredicted RBP12.52□□□□□ -0.4
CHD3-211ENST00000481999 CD79AP11912 226 aa12.52□□□□□ -0.4
CHD3-211ENST00000481999 PRKACBP22694 351 aa12.52□□□□□ -0.4
CHD3-211ENST00000481999 ATXN7L3Q14CW9 347 aaPredicted RBP12.52□□□□□ -0.4
CHD3-211ENST00000481999 PNLIPRP3Q17RR3 467 aa12.52□□□□□ -0.4
CHD3-211ENST00000481999 MOB3CQ70IA8 216 aa12.52□□□□□ -0.4
CHD3-211ENST00000481999 KCTD9Q7L273 389 aa12.52□□□□□ -0.4
CHD3-211ENST00000481999 INO80EQ8NBZ0 244 aaPredicted RBP12.52□□□□□ -0.4
CHD3-211ENST00000481999 OR56B1Q8NGI3 324 aa12.52□□□□□ -0.4
CHD3-211ENST00000481999 TMEM45BQ96B21 275 aa12.52□□□□□ -0.4
CHD3-211ENST00000481999 APH1AQ96BI3 265 aa12.52□□□□□ -0.4
CHD3-211ENST00000481999 ZDHHC11Q9H8X9 412 aa12.52□□□□□ -0.4
CHD3-211ENST00000481999 FN3KRPQ9HA64 309 aa12.52□□□□□ -0.4
CHD3-211ENST00000481999 ELL3Q9HB65 397 aaPredicted RBP12.52□□□□□ -0.4
CHD3-211ENST00000481999 ACKR4Q9NPB9 350 aa12.52□□□□□ -0.4
CHD3-211ENST00000481999 GTF3C1Q12789 2109 aa12.52□□□□□ -0.4
CHD3-211ENST00000481999 INTS1Q8N201 2190 aaKnown RBP12.52□□□□□ -0.41
CHD3-211ENST00000481999 FAM230AA0A1W2PPH8 454 aa12.52□□□□□ -0.41
CHD3-211ENST00000481999 LINC01387J3KSC0 135 aa12.52□□□□□ -0.41
CHD3-211ENST00000481999 BTN1A1Q13410 526 aa12.52□□□□□ -0.41
CHD3-211ENST00000481999 MICBQ29980 383 aa12.52□□□□□ -0.41
CHD3-211ENST00000481999 TMEM178AQ8NBL3 297 aa12.52□□□□□ -0.41
CHD3-211ENST00000481999 MARCH1Q8TCQ1 289 aa12.52□□□□□ -0.41
CHD3-211ENST00000481999 URM1Q9BTM9 101 aaKnown RBP12.52□□□□□ -0.41
CHD3-211ENST00000481999 CHST5Q9GZS9 411 aa12.52□□□□□ -0.41
CHD3-211ENST00000481999 OR10A2Q9H208 303 aa12.52□□□□□ -0.41
CHD3-211ENST00000481999 BCO1Q9HAY6 547 aa12.52□□□□□ -0.41
CHD3-211ENST00000481999 DBX1A6NMT0 343 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 K7EM74 188 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 RAD51DO75771 328 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 TMEM50BP56557 158 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 FAM74A1Q5RGS3 127 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 DRAM2Q6UX65 266 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 ZNF100Q8IYN0 542 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 LHFPL5Q8TAF8 219 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 ZNF629Q9UEG4 869 aaPredicted RBP12.51□□□□□ -0.41
CHD3-211ENST00000481999 C5orf49A4QMS7 147 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 CEACAM18A8MTB9 384 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 EEF1E1-BLOC1S5C9J1V9 151 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 C3orf80F5H4A9 247 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 TSPAN4O14817 238 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 NGFP01138 241 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 CBX5P45973 191 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 CYCSP99999 105 aaKnown RBP12.51□□□□□ -0.41
CHD3-211ENST00000481999 TSC22D1Q15714 1073 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 IGFBP7Q16270 282 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 TMEM128Q5BJH2 165 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 TFAP2EQ6VUC0 442 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 MCEMP1Q8IX19 187 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 MAFIPQ8WZ33 124 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 MRPS24Q96EL2 167 aaKnown RBP12.51□□□□□ -0.41
CHD3-211ENST00000481999 OCSTAMPQ9BR26 566 aa12.51□□□□□ -0.41
CHD3-211ENST00000481999 C5orf51A6NDU8 294 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 SLC22A20A6NK97 555 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 IL18BPO95998 194 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 PSMB6P28072 239 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 PTGFRP43088 359 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 ECH1Q13011 328 aa12.5□□□□□ -0.41
CHD3-211ENST00000481999 PAN3Q58A45 887 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms