RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 ULBP3Q9BZM4 244 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 AICDAQ9GZX7 198 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 MRPS30Q9NP92 439 aaKnown RBP3.39□□□□□ -1.87
UPF3A-207ENST00000481131 FGF20Q9NP95 211 aaPredicted RBP3.39□□□□□ -1.87
UPF3A-207ENST00000481131 ZNF331Q9NQX6 463 aaPredicted RBP3.39□□□□□ -1.87
UPF3A-207ENST00000481131 TMEM216Q9P0N5 145 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 DHCR7Q9UBM7 475 aaKnown RBP3.39□□□□□ -1.87
UPF3A-207ENST00000481131 SLC22A14Q9Y267 594 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 ACOT9Q9Y305 439 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 MRPS18BQ9Y676 258 aaKnown RBP3.39□□□□□ -1.87
UPF3A-207ENST00000481131 ATRXP46100 2492 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 CPAMD8Q8IZJ3 1885 aa3.39□□□□□ -1.87
UPF3A-207ENST00000481131 ATMQ13315 3056 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 EPG5Q9HCE0 2579 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 ZNF860A6NHJ4 632 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 A8MT66 165 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 TCP11X1B4DZS4 312 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 H0YGG7 62 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 TMX2-CTNND1H3BSU7 103 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 RAB29O14966 203 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 POLR1CO15160 346 aaPredicted RBP3.38□□□□□ -1.87
UPF3A-207ENST00000481131 NVLO15381 856 aaKnown RBP3.38□□□□□ -1.87
UPF3A-207ENST00000481131 TOX3O15405 576 aaPredicted RBP3.38□□□□□ -1.87
UPF3A-207ENST00000481131 RAD1O60671 282 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 WBP4O75554 376 aaKnown RBP3.38□□□□□ -1.87
UPF3A-207ENST00000481131 EIF3GO75821 320 aaKnown RBP eCLIP3.38□□□□□ -1.87
UPF3A-207ENST00000481131 OR2B3O76000 313 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 ANXA5P08758 320 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 GFAPP14136 432 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 HPGDP15428 266 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 CNR1P21554 472 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 MDKP21741 143 aaPredicted RBP3.38□□□□□ -1.87
UPF3A-207ENST00000481131 CCR8P51685 355 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 AP1S2P56377 157 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 ATP6V0D1P61421 351 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 REEP5Q00765 189 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 PRDX1Q06830 199 aaKnown RBP3.38□□□□□ -1.87
UPF3A-207ENST00000481131 IFFO1Q0D2I5 559 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 EIF3IQ13347 325 aaKnown RBP3.38□□□□□ -1.87
UPF3A-207ENST00000481131 MPPED2Q15777 294 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 FAM83EQ2M2I3 478 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 RSPO1Q2MKA7 263 aaPredicted RBP3.38□□□□□ -1.87
UPF3A-207ENST00000481131 CARD17Q5XLA6 110 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 TIFABQ6ZNK6 161 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 VN1R4Q7Z5H5 301 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 SLC34A3Q8N130 599 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 STAG3L4Q8TBR4 150 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 CT55Q8WUE5 264 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.38□□□□□ -1.871e-6■■□□□ 11.4
UPF3A-207ENST00000481131 ANKRD7Q92527 254 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 AURKBQ96GD4 344 aaPredicted RBP3.38□□□□□ -1.87
UPF3A-207ENST00000481131 ZNF578Q96N58 590 aaPredicted RBP3.38□□□□□ -1.87
UPF3A-207ENST00000481131 PANX1Q96RD7 426 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 SELENOSQ9BQE4 189 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 DDA1Q9BW61 102 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 FAM192AQ9GZU8 254 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 OR51M1Q9H341 326 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 CENPHQ9H3R5 247 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 FBXO8Q9NRD0 319 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 SLC17A7Q9P2U7 560 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 LGALS13Q9UHV8 139 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 PCTPQ9UKL6 214 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 EML6Q6ZMW3 1958 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 EXPH5Q8NEV8 1989 aa3.38□□□□□ -1.87
UPF3A-207ENST00000481131 CACNA1GO43497 2377 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 IGHV3-64DA0A0J9YX35 117 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 FAM166BA8MTA8 275 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 COPEO14579 308 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 CLOCKO15516 846 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 PLIN3O60664 434 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 DNAJB6O75190 326 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 SMIM24O75264 130 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 CDH16O75309 829 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 ALOX12BO75342 701 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 STK16O75716 305 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 OR2J3O76001 311 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 CLPXO76031 633 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 IGLV2-23P01705 113 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 RPS17P08708 135 aaKnown RBP3.37□□□□□ -1.87
UPF3A-207ENST00000481131 LIPCP11150 499 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 IL1RNP18510 177 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 SLC26A3P40879 764 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 TMED10P49755 219 aaKnown RBP3.37□□□□□ -1.87
UPF3A-207ENST00000481131 UGT2B15P54855 530 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 DOC2AQ14183 400 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 SHISA6Q6ZSJ9 500 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 ZCCHC23Q6ZST2 131 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 ZNF429Q86V71 674 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 MKXQ8IYA7 352 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 PRSS58Q8IYP2 241 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 IQCKQ8N0W5 287 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 OR6X1Q8NH79 312 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 RHEBL1Q8TAI7 183 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 IL22RA2Q969J5 263 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 DUS3LQ96G46 650 aaKnown RBP3.37□□□□□ -1.87
UPF3A-207ENST00000481131 PKNOX2Q96KN3 472 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 ZNF285Q96NJ3 590 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 OR2A5Q96R48 311 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 HBEGFQ99075 208 aa3.37□□□□□ -1.87
UPF3A-207ENST00000481131 SLC29A1Q99808 456 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms