RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 FAM185AQ8N0U4 392 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 ZSCAN4Q8NAM6 433 aaPredicted RBP9.4□□□□□ -0.9
CCM2-213ENST00000480658 ZNRF1Q8ND25 227 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 BEND2Q8NDZ0 799 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 WFDC12Q8WWY7 111 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 FOXRED1Q96CU9 486 aaPredicted RBP9.4□□□□□ -0.9
CCM2-213ENST00000480658 CEP19Q96LK0 163 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 C9orf16Q9BUW7 83 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 TTTY10Q9BZA0 68 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 SEMA6AQ9H2E6 1030 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 SEBOXQ9HB31 216 aaPredicted RBP9.4□□□□□ -0.9
CCM2-213ENST00000480658 INPP5EQ9NRR6 644 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 C1RLQ9NZP8 487 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 GNG8Q9UK08 70 aa9.4□□□□□ -0.9
CCM2-213ENST00000480658 TENM1Q9UKZ4 2725 aa9.4□□□□□ -0.91
CCM2-213ENST00000480658 DOCK11Q5JSL3 2073 aa9.4□□□□□ -0.91
CCM2-213ENST00000480658 A0A1B0GTI1 187 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 A0A1B0GW55 424 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 DAPL1A0PJW8 107 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 RNASEK-C17orf49H0YIS7 233 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 GPR137BO60478 399 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 TK1P04183 234 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 DUX4L2P0CJ85 424 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 DUX4L3P0CJ86 424 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 DUX4L4P0CJ87 422 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 DUX4L5P0CJ88 424 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 DUX4L6P0CJ89 424 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 DUX4L7P0CJ90 424 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 ZNF20P17024 532 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 MDKP21741 143 aaPredicted RBP9.39□□□□□ -0.91
CCM2-213ENST00000480658 EPHA2P29317 976 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 ATP1B3P54709 279 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 LGALS4P56470 323 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 MEF2CQ06413 473 aaPredicted RBP9.39□□□□□ -0.91
CCM2-213ENST00000480658 SPIN3Q5JUX0 258 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 BRICD5Q6PL45 260 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 DUX4L9Q6RFH8 374 aaPredicted RBP9.39□□□□□ -0.91
CCM2-213ENST00000480658 LHFPL2Q6ZUX7 228 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 UTS2BQ765I0 119 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 GDPD3Q7L5L3 318 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 RORBQ92753 470 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 CDCA4Q9BXL8 241 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 RANBP3Q9H6Z4 567 aaPredicted RBP9.39□□□□□ -0.91
CCM2-213ENST00000480658 PPP1R3EQ9H7J1 279 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 GPR173Q9NS66 373 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 DUX4Q9UBX2 424 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 MAB21L2Q9Y586 359 aa9.39□□□□□ -0.91
CCM2-213ENST00000480658 LOC107986453A0A1B0GWG9 222 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 FUOMA2VDF0 154 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 SAC3D1A6NKF1 404 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 PRR32B1ATL7 298 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 K7N7A8 449 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 SLC16A6O15403 523 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 ANGPTL7O43827 346 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 FCN3O75636 299 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 FADS2O95864 444 aaKnown RBP9.38□□□□□ -0.91
CCM2-213ENST00000480658 IGHV4-59P01825 116 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 AMY2BP19961 511 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 BMXP51813 675 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 FDX2Q6P4F2 183 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 TREML4Q6UXN2 200 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 BCDIN3DQ7Z5W3 292 aaKnown RBP9.38□□□□□ -0.91
CCM2-213ENST00000480658 OR8H2Q8N162 312 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 ACBD7Q8N6N7 88 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 Q8N7P7 452 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 OR13D1Q8NGV5 346 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 TNFRSF14Q92956 283 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 EME1Q96AY2 570 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 SEH1LQ96EE3 360 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 RDH12Q96NR8 316 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 TBX5Q99593 518 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 FGF23Q9GZV9 251 aaPredicted RBP9.38□□□□□ -0.91
CCM2-213ENST00000480658 C16orf95Q9H693 158 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 C8orf4Q9NR00 106 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 HHLA2Q9UM44 414 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 TBL2Q9Y4P3 447 aaKnown RBP9.38□□□□□ -0.91
CCM2-213ENST00000480658 RNF114Q9Y508 228 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 ARHGAP32A7KAX9 2087 aa9.38□□□□□ -0.91
CCM2-213ENST00000480658 FAM230AA0A1W2PPH8 454 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 hADV38S2A0JD32 116 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 IRGMA1A4Y4 181 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 M0R129 80 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 EBAG9O00559 213 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 EI24O14681 340 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 TSPAN9O75954 239 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 CLPXO76031 633 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 HTR1AP08908 422 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 CCDC159P0C7I6 412 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 SELLP14151 372 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 ARHGDIBP52566 201 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 ISL1P61371 349 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 ERVK11-1P61568 191 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 RAB40BQ12829 278 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 LRRC75BQ2VPJ9 315 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 PDZD9Q8IXQ8 264 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 SYS1Q8N2H4 156 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 ASCC1Q8N9N2 400 aaKnown RBP9.37□□□□□ -0.91
CCM2-213ENST00000480658 OR4C13Q8NGP0 309 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 PYDC1Q8WXC3 89 aa9.37□□□□□ -0.91
CCM2-213ENST00000480658 RNFT2Q96EX2 444 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms