RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 MYPOPQ86VE0 399 aaPredicted RBP8.56□□□□□ -1.04
VEGFA-212ENST00000480614 EXTL1Q92935 676 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 ACY3Q96HD9 319 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 PAPPAQ13219 1627 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 hADV38S2A0JD32 116 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 DNASE2O00115 360 aaPredicted RBP8.56□□□□□ -1.04
VEGFA-212ENST00000480614 TMPRSS11DO60235 418 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 APEHP13798 732 aaKnown RBP8.56□□□□□ -1.04
VEGFA-212ENST00000480614 ZNF596Q8TC21 504 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 C1RLQ9NZP8 487 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 UBR3Q6ZT12 1888 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 GATCO43716 136 aaKnown RBP8.56□□□□□ -1.04
VEGFA-212ENST00000480614 GPX5O75715 221 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 IGLV3-27P01718 113 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 HIST1H3AP68431 136 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 RSPO2Q6UXX9 243 aaPredicted RBP8.56□□□□□ -1.04
VEGFA-212ENST00000480614 FAHP16930 419 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 EMDP50402 254 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 FAM3AP98173 230 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 DHRS11Q6UWP2 260 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 CLEC9AQ6UXN8 241 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 SPICQ8N5J4 248 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 BCL7CQ8WUZ0 217 aaPredicted RBP8.56□□□□□ -1.04
VEGFA-212ENST00000480614 FAAP24Q9BTP7 215 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 HSPB8Q9UJY1 196 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 PPIL1Q9Y3C6 166 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 TMEM202A6NGA9 273 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 OPN1MWP04001 364 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 OPN1MW2P0DN77 364 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 OPN1MW3P0DN78 364 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 BRS3P32247 399 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 RAG2P55895 527 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 DEGS2Q6QHC5 323 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 TCTEX1D1Q8N7M0 179 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 ADIPOR1Q96A54 375 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 GPR137Q96N19 417 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 OR2A5Q96R48 311 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 MRPL22Q9NWU5 206 aaKnown RBP8.56□□□□□ -1.04
VEGFA-212ENST00000480614 A6NDN8 102 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 HTR1DP28221 377 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 ZNF750Q32MQ0 723 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 PRR14Q9BWN1 585 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 GSX1Q9H4S2 264 aaPredicted RBP8.56□□□□□ -1.04
VEGFA-212ENST00000480614 HMGA1P17096 107 aaKnown RBP8.56□□□□□ -1.04
VEGFA-212ENST00000480614 ACP1P24666 158 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 OR1C1Q15619 314 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 CADM4Q8NFZ8 388 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 RHOFQ9HBH0 211 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 LPAR3Q9UBY5 353 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 A0A1W2PPC4 97 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 DHRS3O75911 302 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 SFTA3P0C7M3 94 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 RPL30P62888 115 aaKnown RBP8.56□□□□□ -1.04
VEGFA-212ENST00000480614 FOXF1Q12946 379 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 LRP12Q9Y561 859 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 NCKAP5O14513 1909 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 A0A087WUJ7 227 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 A0A0A6YYD5 115 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 EXOSC2Q13868 293 aaKnown RBP8.56□□□□□ -1.04
VEGFA-212ENST00000480614 TEX261Q6UWH6 196 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 U3KQ87 197 aa8.56□□□□□ -1.04
VEGFA-212ENST00000480614 KLF3P57682 345 aaPredicted RBP8.55□□□□□ -1.04
VEGFA-212ENST00000480614 ASTLQ6HA08 431 aaPredicted RBP8.55□□□□□ -1.04
VEGFA-212ENST00000480614 FAHD2BQ6P2I3 314 aaPredicted RBP8.55□□□□□ -1.04
VEGFA-212ENST00000480614 FAHD2AQ96GK7 314 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 TMEM167BQ9NRX6 74 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 ICAM5Q9UMF0 924 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 C11orf87Q6NUJ2 197 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 TOMM20LQ6UXN7 152 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 ZNF429Q86V71 674 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 ZNF426Q9BUY5 554 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 TRBV5-4A0A0C4DH59 114 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 PTHLHP12272 177 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 OPRK1P41145 380 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 CEACAM16Q2WEN9 425 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 DGAT2L7PQ6IED9 249 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 STXBP6Q8NFX7 210 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 C10orf35Q96D05 121 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 MED29Q9NX70 200 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 TMEM265A0A087WTH1 108 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 A0A0B4J2E0 115 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 A0A1B0GX12 115 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 SCN10AQ9Y5Y9 1956 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 PTOV1Q86YD1 416 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 LSMEM1Q8N8F7 131 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 MZB1Q8WU39 189 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 NAT8BQ9UHF3 227 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 GLDNQ6ZMI3 551 aaPredicted RBP8.55□□□□□ -1.04
VEGFA-212ENST00000480614 OR13C5Q8NGS8 318 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 SLC22A13Q9Y226 551 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 DCTDP32321 178 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 MEOX2P50222 304 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 TUSC1Q2TAM9 212 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 TCTN3Q6NUS6 607 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 PARD6AQ9NPB6 346 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 MAP1LC3B2A6NCE7 125 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 CD3DP04234 171 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 HIST1H1EP10412 219 aaKnown RBP8.55□□□□□ -1.04
VEGFA-212ENST00000480614 FAM74A3Q4VXF1 159 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 LILRB1Q8NHL6 650 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms