RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 TRAPPC2LH3BP13 241 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 TPPPO94811 219 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 GNB3P16520 340 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 GABRR1P24046 479 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 MPZP25189 248 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 KIR2DL3P43628 341 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 GUCA2AQ02747 115 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 SCN1BQ07699 218 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 IL24Q13007 206 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 PDCD1Q15116 288 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 MPPED2Q15777 294 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 TAF9Q16594 264 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 NKPD1Q17RQ9 610 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 PIGYQ3MUY2 71 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 ZNF260Q3ZCT1 412 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 PRAMEF6Q5VXH4 476 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 TRIQKQ629K1 86 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 TMEM200AQ86VY9 491 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 C11orf53Q8IXP5 236 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 FBXL14Q8N1E6 418 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 C19orf18Q8NEA5 215 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 OR56B1Q8NGI3 324 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 OR52I2Q8NH67 350 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 C15orf40Q8WUR7 153 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 FCAMRQ8WWV6 532 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 YIPF5Q969M3 257 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 Q96M66 194 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 PKIBQ9C010 78 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 PCDHB16Q9NRJ7 776 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 RBFOX1Q9NWB1 397 aaKnown RBP9.52□□□□□ -0.89
APTX-223ENST00000479656 RALYQ9UKM9 306 aaKnown RBP9.52□□□□□ -0.89
APTX-223ENST00000479656 ST3GAL6Q9Y274 331 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 RNF115Q9Y4L5 304 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 ADGRG4Q8IZF6 3080 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 HIVEP3Q5T1R4 2406 aa9.52□□□□□ -0.89
APTX-223ENST00000479656 ISPDA4D126 451 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 GABARAPH6UMI1 98 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 J3QT63 122 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 GSTZ1O43708 216 aaPredicted RBP9.51□□□□□ -0.89
APTX-223ENST00000479656 SCGNO76038 276 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 LOXP28300 417 aaPredicted RBP9.51□□□□□ -0.89
APTX-223ENST00000479656 BLVRBP30043 206 aaPredicted RBP9.51□□□□□ -0.89
APTX-223ENST00000479656 PRSS3P35030 304 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 SERPINF1P36955 418 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 SRP9P49458 86 aaKnown RBP9.51□□□□□ -0.89
APTX-223ENST00000479656 ZNF81P51508 661 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 FAM189A2Q15884 450 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 SPRNQ5BIV9 151 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 PLAC9Q5JTB6 97 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 ZNF826PQ6ZT77 177 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 POC5Q8NA72 575 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 Q8NFD4 153 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 LILRB1Q8NHL6 650 aaPredicted RBP9.51□□□□□ -0.89
APTX-223ENST00000479656 SMIM4Q8WVI0 70 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 RAB3CQ96E17 227 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 ELMOD3Q96FG2 381 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 UFSP2Q9NUQ7 469 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 ZNF581Q9P0T4 197 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 KLK11Q9UBX7 282 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 MEIS3P1A6NDR6 274 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 TMEM235A6NFC5 223 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 FOXI3A8MTJ6 420 aaPredicted RBP9.51□□□□□ -0.89
APTX-223ENST00000479656 GEMIN2O14893 280 aaKnown RBP9.51□□□□□ -0.89
APTX-223ENST00000479656 ORC5O43913 435 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 CPT2P23786 658 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 APOBEC3AP31941 199 aaPredicted RBP9.51□□□□□ -0.89
APTX-223ENST00000479656 RBMXP38159 391 aaKnown RBP9.51□□□□□ -0.89
APTX-223ENST00000479656 INPP1P49441 399 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 SNU13P55769 128 aaKnown RBP9.51□□□□□ -0.89
APTX-223ENST00000479656 RGS21Q2M5E4 152 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 OLFML2AQ68BL7 652 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 ZNF57Q68EA5 555 aaPredicted RBP9.51□□□□□ -0.89
APTX-223ENST00000479656 ELP2Q6IA86 826 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 Q6ZTK2 550 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 TRIM63Q969Q1 353 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 MRPS24Q96EL2 167 aaKnown RBP9.51□□□□□ -0.89
APTX-223ENST00000479656 ARHGAP5-AS1Q96IT6 56 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 CISD1Q9NZ45 108 aaKnown RBP9.51□□□□□ -0.89
APTX-223ENST00000479656 TBC1D24Q9ULP9 559 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 KCNK7Q9Y2U2 307 aa9.51□□□□□ -0.89
APTX-223ENST00000479656 A6NLC8 198 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 PLA2G10O15496 165 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 AKR7A2O43488 359 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 IGHV1-46P01743 117 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 FCER2P06734 321 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 RNF224P0DH78 156 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 PRKACAP17612 351 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 CD200P41217 278 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 GMFBP60983 142 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 FGF12P61328 243 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 MRPS10P82664 201 aaKnown RBP9.5□□□□□ -0.89
APTX-223ENST00000479656 MZT1Q08AG7 82 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 SIGIRRQ6IA17 410 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 DNM1P46Q6ZS02 220 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 ZCCHC24Q8N2G6 241 aaKnown RBP9.5□□□□□ -0.89
APTX-223ENST00000479656 SEH1LQ96EE3 360 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 OR2V2Q96R30 315 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 NUDT16L1Q9BRJ7 211 aaKnown RBP9.5□□□□□ -0.89
APTX-223ENST00000479656 IL36RNQ9UBH0 155 aa9.5□□□□□ -0.89
APTX-223ENST00000479656 POLDIP2Q9Y2S7 368 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms