RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 ZNF775Q96BV0 537 aaPredicted RBP10.59□□□□□ -0.71
PTPRF-212ENST00000477970 DNTTIP1Q9H147 329 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 OPA3Q9H6K4 179 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 PLEKHJ1Q9NW61 149 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 EHFQ9NZC4 300 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 DUX4Q9UBX2 424 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 SLC7A11Q9UPY5 501 aa10.59□□□□□ -0.71
PTPRF-212ENST00000477970 LOC100509620A0A075B734 347 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 CSTBP04080 98 aaKnown RBP10.58□□□□□ -0.72
PTPRF-212ENST00000477970 SERPINA5P05154 406 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 CTSDP07339 412 aaPredicted RBP10.58□□□□□ -0.72
PTPRF-212ENST00000477970 ZP3P21754 424 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 NPY4RP50391 375 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 ZNF92Q03936 586 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 FOXC1Q12948 553 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 SRSF7Q16629 238 aaKnown RBP eCLIP10.58□□□□□ -0.72
PTPRF-212ENST00000477970 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.58□□□□□ -0.72
PTPRF-212ENST00000477970 ST6GALNAC5Q9BVH7 336 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 RASL12Q9NYN1 266 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 DOCK10Q96BY6 2186 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 TNRC6AQ8NDV7 1962 aaKnown RBP10.58□□□□□ -0.72
PTPRF-212ENST00000477970 CCSO14618 274 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 CRYZL1O95825 349 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 LIPCP11150 499 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 PDZK1IP1Q13113 114 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 PABPC1L2AQ5JQF8 200 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 DHRS11Q6UWP2 260 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 PDZD9Q8IXQ8 264 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 KDF1Q8NAX2 398 aaPredicted RBP10.58□□□□□ -0.72
PTPRF-212ENST00000477970 VRK1Q99986 396 aaPredicted RBP10.58□□□□□ -0.72
PTPRF-212ENST00000477970 SCNM1Q9BWG6 230 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 GP6Q9HCN6 339 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 CHMP1AQ9HD42 196 aaPredicted RBP10.58□□□□□ -0.72
PTPRF-212ENST00000477970 SDHAF2Q9NX18 166 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 PFDN2Q9UHV9 154 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 ANXA10Q9UJ72 324 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 A8MXK9 166 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 ZNF587BE7ETH6 402 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 F8VVB4 439 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 F8VWA3 439 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 I3L521 148 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 SP1P08047 785 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 CD82P27701 267 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 SERPINF1P36955 418 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 NAAAQ02083 359 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 IL15RAQ13261 267 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 ALKAL2Q6UX46 152 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 TMEM251Q8N6I4 163 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 OR1S1Q8NH92 325 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 SLC7A10Q9NS82 523 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 RDH8Q9NYR8 311 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 SESN1Q9Y6P5 492 aa10.58□□□□□ -0.72
PTPRF-212ENST00000477970 TEX13DA0A0J9YY54 714 aaPredicted RBP10.57□□□□□ -0.72
PTPRF-212ENST00000477970 FGF2P09038 288 aa10.57□□□□□ -0.72
PTPRF-212ENST00000477970 RTP5Q14D33 572 aa10.57□□□□□ -0.72
PTPRF-212ENST00000477970 C6orf201Q7Z4U5 140 aa10.57□□□□□ -0.72
PTPRF-212ENST00000477970 OSR2Q8N2R0 312 aa10.57□□□□□ -0.72
PTPRF-212ENST00000477970 CPEB3Q8NE35 698 aaKnown RBP10.57□□□□□ -0.72
PTPRF-212ENST00000477970 CASTOR1Q8WTX7 329 aa10.57□□□□□ -0.72
PTPRF-212ENST00000477970 REPIN1Q9BWE0 567 aaKnown RBP10.57□□□□□ -0.72
PTPRF-212ENST00000477970 MSTNO14793 375 aa10.57□□□□□ -0.72
PTPRF-212ENST00000477970 HTR3BO95264 441 aa10.57□□□□□ -0.72
PTPRF-212ENST00000477970 CST4P01036 141 aa10.57□□□□□ -0.72
PTPRF-212ENST00000477970 ITGA3P26006 1051 aa10.57□□□□□ -0.72
PTPRF-212ENST00000477970 ARR3P36575 388 aa10.57□□□□□ -0.72
PTPRF-212ENST00000477970 ELP2Q6IA86 826 aa10.57□□□□□ -0.72
PTPRF-212ENST00000477970 Q6ZS49 121 aa10.57□□□□□ -0.72
PTPRF-212ENST00000477970 ZFP62Q8NB50 900 aaPredicted RBP10.57□□□□□ -0.72
PTPRF-212ENST00000477970 SLC39A7Q92504 469 aa10.57□□□□□ -0.72
PTPRF-212ENST00000477970 C14orf166Q9Y224 244 aaKnown RBP10.57□□□□□ -0.72
PTPRF-212ENST00000477970 KCNMB2Q9Y691 235 aa10.57□□□□□ -0.72
PTPRF-212ENST00000477970 FAM230AA0A1W2PPH8 454 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 KLRC4-KLRK1H3BQV0 150 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 GABRR1P24046 479 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 MAGEA5P43359 124 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 ARF1P84077 181 aaKnown RBP10.56□□□□□ -0.72
PTPRF-212ENST00000477970 HES3Q5TGS1 186 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 MOB3CQ70IA8 216 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 KCTD9Q7L273 389 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 INO80EQ8NBZ0 244 aaPredicted RBP10.56□□□□□ -0.72
PTPRF-212ENST00000477970 SEC22AQ96IW7 307 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 ARPC5LQ9BPX5 153 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 ELL3Q9HB65 397 aaPredicted RBP10.56□□□□□ -0.72
PTPRF-212ENST00000477970 NECAP2Q9NVZ3 263 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 AK3Q9UIJ7 227 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 IGKV1-12A0A0C4DH73 117 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 KRBOX1C9JBD0 128 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 IGKV1D-12P01611 117 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 RLN2P04090 185 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 FCGR3AP08637 254 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 CELA3AP09093 270 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 PATE4P0C8F1 98 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 ANKRD55Q3KP44 614 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 PRSS54Q6PEW0 395 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 LRRC20Q8TCA0 184 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 C2orf50Q96LR7 162 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 MBD2Q9UBB5 411 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 PQLC2LA1A4F0 135 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 PET100P0DJ07 73 aa10.56□□□□□ -0.72
PTPRF-212ENST00000477970 TMEM211Q6ICI0 200 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms