RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 ZNF71Q9NQZ8 489 aaPredicted RBP6.84□□□□□ -1.31
VMA21-203ENST00000477649 WASF3Q9UPY6 502 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 POLDIP2Q9Y2S7 368 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 KCNK7Q9Y2U2 307 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 STARD10Q9Y365 291 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 CNTRLQ7Z7A1 2325 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 PHF3Q92576 2039 aaKnown RBP6.83□□□□□ -1.32
VMA21-203ENST00000477649 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.83□□□□□ -1.32
VMA21-203ENST00000477649 ZNF503-AS2A6NEH8 195 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 WIPF3A6NGB9 483 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 TMEM210A6NLX4 147 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 PRRG2O14669 202 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 MSTNO14793 375 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 RGS13O14921 159 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 SSX5O60225 188 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 SMPD2O60906 423 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 RAD51DO75771 328 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 TNFSF13O75888 250 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 OR2A4O95047 310 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 IGLV1-44P01699 117 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 AMY2BP19961 511 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 FUT3P21217 361 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 CHATP28329 748 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 CEACAM8P31997 349 aaPredicted RBP6.83□□□□□ -1.32
VMA21-203ENST00000477649 OPRM1P35372 400 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 UCP2P55851 309 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 RBM11P57052 281 aaKnown RBP6.83□□□□□ -1.32
VMA21-203ENST00000477649 FGF12P61328 243 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 PPP1CBP62140 327 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 IL24Q13007 206 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 IL13RA2Q14627 380 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 NDUFA5Q16718 116 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 PLEKHN1Q494U1 663 aaPredicted RBP6.83□□□□□ -1.32
VMA21-203ENST00000477649 TIMM23BQ5SRD1 257 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 TMEM211Q6ICI0 200 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 SEZ6L2Q6UXD5 910 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 Q6ZS49 121 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 C1QL2Q7Z5L3 287 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 SLC25A42Q86VD7 318 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 GCNT2Q8N0V5 402 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 ZNF611Q8N823 705 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 BEST4Q8NFU0 473 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 OR5AP2Q8NGF4 316 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 OR5D18Q8NGL1 313 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 OR5M9Q8NGP3 310 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 ZFAND1Q8TCF1 268 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 NUDCD2Q8WVJ2 157 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 OR5P3Q8WZ94 311 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 CMBLQ96DG6 245 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 STARD4Q96DR4 205 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 RNF170Q96K19 258 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 FYTTD1Q96QD9 318 aaKnown RBP6.83□□□□□ -1.32
VMA21-203ENST00000477649 OR2A7Q96R45 310 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 NKX3-1Q99801 234 aaPredicted RBP6.83□□□□□ -1.32
VMA21-203ENST00000477649 NICN1Q9BSH3 213 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 RTL8AQ9BWD3 113 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 ZNF436Q9C0F3 470 aaPredicted RBP6.83□□□□□ -1.32
VMA21-203ENST00000477649 TINAGL1Q9GZM7 467 aaPredicted RBP6.83□□□□□ -1.32
VMA21-203ENST00000477649 SLA2Q9H6Q3 261 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 ZMAT3Q9HA38 289 aaKnown RBP6.83□□□□□ -1.32
VMA21-203ENST00000477649 ZNF69Q9UC07 566 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 ZNF222Q9UK12 451 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 ST3GAL6Q9Y274 331 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 SPEF1Q9Y4P9 236 aa6.83□□□□□ -1.32
VMA21-203ENST00000477649 CEP250Q9BV73 2442 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 CACNA1BQ00975 2339 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 IGKV1-27A0A075B6S5 117 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 A0A0B4J2A0 478 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 LRP5LA4QPB2 252 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 MEIS3P1A6NDR6 274 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 OR5H1A6NKK0 313 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 IQCF6A8MYZ5 107 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 TRAPPC2LH3BP13 241 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 H7C1Q1 480 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 J3QT63 122 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 NGFP01138 241 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 HPXP02790 462 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 OR4E1P0C645 316 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 HLA-GP17693 338 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 ANXA7P20073 488 aaKnown RBP6.82□□□□□ -1.32
VMA21-203ENST00000477649 IL32P24001 234 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 HRH1P35367 487 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 WNT5AP41221 380 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 IDH3GP51553 393 aaPredicted RBP6.82□□□□□ -1.32
VMA21-203ENST00000477649 SNU13P55769 128 aaKnown RBP6.82□□□□□ -1.32
VMA21-203ENST00000477649 GMFBP60983 142 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 TSPAN5P62079 268 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 RBPJQ06330 500 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 TBR1Q16650 682 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 CHRFAM7AQ494W8 412 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 SCGB2B2Q4G0G5 96 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 C4orf46Q504U0 113 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 FAM76BQ5HYJ3 339 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 ATPAF1Q5TC12 328 aaPredicted RBP6.82□□□□□ -1.32
VMA21-203ENST00000477649 LIN54Q6MZP7 749 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 FAAP20Q6NZ36 180 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 SLC25A26Q70HW3 274 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 BHLHA15Q7RTS1 189 aaPredicted RBP6.82□□□□□ -1.32
VMA21-203ENST00000477649 WDR31Q8NA23 367 aa6.82□□□□□ -1.32
VMA21-203ENST00000477649 TMEM185AQ8NFB2 350 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms