RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 ACTA2P62736 377 aa17.85■□□□□ 0.45
COL9A3-211ENST00000477612 ACTG2P63267 376 aa17.85■□□□□ 0.45
COL9A3-211ENST00000477612 GALEQ14376 348 aa17.85■□□□□ 0.45
COL9A3-211ENST00000477612 LDLRAD3Q86YD5 345 aa17.85■□□□□ 0.45
COL9A3-211ENST00000477612 PIP4P2Q8N4L2 257 aa17.85■□□□□ 0.45
COL9A3-211ENST00000477612 DNAAF1Q8NEP3 725 aa17.85■□□□□ 0.45
COL9A3-211ENST00000477612 PELI1Q96FA3 418 aa17.85■□□□□ 0.45
COL9A3-211ENST00000477612 FAM230AA0A1W2PPH8 454 aa17.84■□□□□ 0.45
COL9A3-211ENST00000477612 H3BSH0 61 aa17.84■□□□□ 0.45
COL9A3-211ENST00000477612 NXPH2O95156 264 aa17.84■□□□□ 0.45
COL9A3-211ENST00000477612 KNG1P01042 644 aa17.84■□□□□ 0.45
COL9A3-211ENST00000477612 HTR1AP08908 422 aa17.84■□□□□ 0.45
COL9A3-211ENST00000477612 UTS2BQ765I0 119 aa17.84■□□□□ 0.45
COL9A3-211ENST00000477612 SYS1Q8N2H4 156 aa17.84■□□□□ 0.45
COL9A3-211ENST00000477612 TMEM185AQ8NFB2 350 aa17.84■□□□□ 0.45
COL9A3-211ENST00000477612 TRMT10AQ8TBZ6 339 aaKnown RBP17.84■□□□□ 0.45
COL9A3-211ENST00000477612 ADAT3Q96EY9 351 aaPredicted RBP17.84■□□□□ 0.45
COL9A3-211ENST00000477612 ZNF747Q9BV97 191 aa17.84■□□□□ 0.45
COL9A3-211ENST00000477612 SEBOXQ9HB31 216 aaPredicted RBP17.84■□□□□ 0.45
COL9A3-211ENST00000477612 SIRT7Q9NRC8 400 aa17.84■□□□□ 0.45
COL9A3-211ENST00000477612 MTCH1Q9NZJ7 389 aa17.84■□□□□ 0.45
COL9A3-211ENST00000477612 MYRFQ9Y2G1 1151 aa17.84■□□□□ 0.45
COL9A3-211ENST00000477612 A0A0U1RQK1 487 aa17.83■□□□□ 0.44
COL9A3-211ENST00000477612 SLC1A7O00341 560 aa17.83■□□□□ 0.44
COL9A3-211ENST00000477612 RAB40BQ12829 278 aa17.83■□□□□ 0.44
COL9A3-211ENST00000477612 CNN3Q15417 329 aaKnown RBP17.83■□□□□ 0.44
COL9A3-211ENST00000477612 ZSCAN26Q16670 478 aa17.83■□□□□ 0.44
COL9A3-211ENST00000477612 APH1BQ8WW43 257 aa17.83■□□□□ 0.44
COL9A3-211ENST00000477612 SSMEM1Q8WWF3 244 aa17.83■□□□□ 0.44
COL9A3-211ENST00000477612 BORCS8Q96FH0 119 aa17.83■□□□□ 0.44
COL9A3-211ENST00000477612 MRPL48Q96GC5 212 aaKnown RBP17.83■□□□□ 0.44
COL9A3-211ENST00000477612 C4orf36Q96KX1 117 aa17.83■□□□□ 0.44
COL9A3-211ENST00000477612 FAM234AQ9H0X4 552 aa17.83■□□□□ 0.44
COL9A3-211ENST00000477612 METTL8Q9H825 291 aaKnown RBP17.83■□□□□ 0.44
COL9A3-211ENST00000477612 ELL3Q9HB65 397 aaPredicted RBP17.83■□□□□ 0.44
COL9A3-211ENST00000477612 INPP5EQ9NRR6 644 aa17.83■□□□□ 0.44
COL9A3-211ENST00000477612 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.83■□□□□ 0.44
COL9A3-211ENST00000477612 IGKV1-9A0A0C4DH69 117 aa17.82■□□□□ 0.44
COL9A3-211ENST00000477612 A0A1W2PQ09 198 aa17.82■□□□□ 0.44
COL9A3-211ENST00000477612 OR4C45A6NMZ5 311 aa17.82■□□□□ 0.44
COL9A3-211ENST00000477612 J3QLW9 94 aa17.82■□□□□ 0.44
COL9A3-211ENST00000477612 FADS2O95864 444 aaKnown RBP17.82■□□□□ 0.44
COL9A3-211ENST00000477612 ZNF19P17023 458 aa17.82■□□□□ 0.44
COL9A3-211ENST00000477612 UBE2E1P51965 193 aa17.82■□□□□ 0.44
COL9A3-211ENST00000477612 RPL15P61313 204 aaKnown RBP17.82■□□□□ 0.44
COL9A3-211ENST00000477612 ALKBH1Q13686 389 aaKnown RBP17.82■□□□□ 0.44
COL9A3-211ENST00000477612 LPCAT4Q643R3 524 aa17.82■□□□□ 0.44
COL9A3-211ENST00000477612 NCR3LG1Q68D85 454 aa17.82■□□□□ 0.44
COL9A3-211ENST00000477612 LHFPL3Q86UP9 236 aa17.82■□□□□ 0.44
COL9A3-211ENST00000477612 TBC1D15Q8TC07 691 aa17.82■□□□□ 0.44
COL9A3-211ENST00000477612 ALG8Q9BVK2 526 aa17.82■□□□□ 0.44
COL9A3-211ENST00000477612 ERVK13-1Q9NX77 482 aa17.82■□□□□ 0.44
COL9A3-211ENST00000477612 SMPD3Q9NY59 655 aaPredicted RBP17.82■□□□□ 0.44
COL9A3-211ENST00000477612 HHLA2Q9UM44 414 aa17.82■□□□□ 0.44
COL9A3-211ENST00000477612 CAB39Q9Y376 341 aaPredicted RBP17.82■□□□□ 0.44
COL9A3-211ENST00000477612 RPL36Q9Y3U8 105 aaKnown RBP17.82■□□□□ 0.44
COL9A3-211ENST00000477612 POM121CA8CG34 1229 aa17.81■□□□□ 0.44
COL9A3-211ENST00000477612 BAG2O95816 211 aa17.81■□□□□ 0.44
COL9A3-211ENST00000477612 TK1P04183 234 aa17.81■□□□□ 0.44
COL9A3-211ENST00000477612 IER3P46695 156 aa17.81■□□□□ 0.44
COL9A3-211ENST00000477612 RBP2P50120 134 aa17.81■□□□□ 0.44
COL9A3-211ENST00000477612 MRPL28Q13084 256 aaKnown RBP17.81■□□□□ 0.44
COL9A3-211ENST00000477612 BLMHQ13867 455 aa17.81■□□□□ 0.44
COL9A3-211ENST00000477612 PDZD9Q8IXQ8 264 aa17.81■□□□□ 0.44
COL9A3-211ENST00000477612 C11orf42Q8N5U0 333 aa17.81■□□□□ 0.44
COL9A3-211ENST00000477612 FGGYQ96C11 551 aa17.81■□□□□ 0.44
COL9A3-211ENST00000477612 CEP19Q96LK0 163 aa17.81■□□□□ 0.44
COL9A3-211ENST00000477612 CHIAQ9BZP6 476 aa17.81■□□□□ 0.44
COL9A3-211ENST00000477612 AMBNQ9NP70 447 aa17.81■□□□□ 0.44
COL9A3-211ENST00000477612 C19orf12Q9NSK7 152 aa17.81■□□□□ 0.44
COL9A3-211ENST00000477612 MMP24Q9Y5R2 645 aa17.81■□□□□ 0.44
COL9A3-211ENST00000477612 FAM181BA6NEQ2 426 aa17.8■□□□□ 0.44
COL9A3-211ENST00000477612 F8VVB4 439 aa17.8■□□□□ 0.44
COL9A3-211ENST00000477612 F8VWA3 439 aa17.8■□□□□ 0.44
COL9A3-211ENST00000477612 K7N7A8 449 aa17.8■□□□□ 0.44
COL9A3-211ENST00000477612 RPSAP08865 295 aaKnown RBP17.8■□□□□ 0.44
COL9A3-211ENST00000477612 ATF1P18846 271 aa17.8■□□□□ 0.44
COL9A3-211ENST00000477612 EEF1B2P24534 225 aaKnown RBP17.8■□□□□ 0.44
COL9A3-211ENST00000477612 CEBPDP49716 269 aaPredicted RBP17.8■□□□□ 0.44
COL9A3-211ENST00000477612 ATP1B3P54709 279 aa17.8■□□□□ 0.44
COL9A3-211ENST00000477612 ACSM1Q08AH1 577 aa17.8■□□□□ 0.44
COL9A3-211ENST00000477612 KLHL22Q53GT1 634 aa17.8■□□□□ 0.44
COL9A3-211ENST00000477612 HCP5Q6MZN7 132 aa17.8■□□□□ 0.44
COL9A3-211ENST00000477612 OR52I1Q8NGK6 324 aa17.8■□□□□ 0.44
COL9A3-211ENST00000477612 OR5D13Q8NGL4 314 aa17.8■□□□□ 0.44
COL9A3-211ENST00000477612 STMN2Q93045 179 aa17.8■□□□□ 0.44
COL9A3-211ENST00000477612 JAM3Q9BX67 310 aa17.8■□□□□ 0.44
COL9A3-211ENST00000477612 ISG20L2Q9H9L3 353 aaKnown RBP17.8■□□□□ 0.44
COL9A3-211ENST00000477612 NPFFO15130 113 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 ZNF737O75373 536 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 WBP4O75554 376 aaKnown RBP17.79■□□□□ 0.44
COL9A3-211ENST00000477612 MT-ND2P03891 347 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 CHRM2P08172 466 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 FBP1P09467 338 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 PRKACBP22694 351 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 AZGP1P25311 298 aaKnown RBP17.79■□□□□ 0.44
COL9A3-211ENST00000477612 CAPZA1P52907 286 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 DLX1P56177 255 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 RPL31P62899 125 aaKnown RBP17.79■□□□□ 0.44
COL9A3-211ENST00000477612 KLRD1Q13241 179 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms