RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TMEM225BP0DP42 221 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 CFHR2P36980 270 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 TMEM33P57088 247 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 LSM3P62310 102 aaKnown RBP12.87□□□□□ -0.35
SEC13-215ENST00000477547 PDZK1IP1Q13113 114 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 GPR107Q5VW38 600 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 GLT8D1Q68CQ7 371 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 GDPGP1Q6ZNW5 385 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 SLC16A12Q6ZSM3 486 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 MKXQ8IYA7 352 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 WFDC11Q8NEX6 87 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 RAB1CQ92928 201 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 CEP19Q96LK0 163 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 NARFLQ9H6Q4 476 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 SMURF1Q9HCE7 757 aa12.87□□□□□ -0.35
SEC13-215ENST00000477547 AK6Q9Y3D8 172 aaKnown RBP12.87□□□□□ -0.35
SEC13-215ENST00000477547 FN1P02751 2386 aaKnown RBP12.86□□□□□ -0.35
SEC13-215ENST00000477547 JMJD1CQ15652 2540 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 SMIM30A4D0T7 59 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 C3orf80F5H4A9 247 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.86□□□□□ -0.35
SEC13-215ENST00000477547 LGALS8O00214 317 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 WNT9BO14905 357 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 NXPH2O95156 264 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 GABARAPO95166 117 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 IGHV2-70P01814 119 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 SLC25A16P16260 332 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 GLRA1P23415 457 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 NR4A2P43354 598 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 MTNR1BP49286 362 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 ZMYND11Q15326 602 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 SMIM21Q3B7S5 101 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 BIVMQ86UB2 503 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 GFI1Q99684 422 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 NRIP2Q9BQI9 281 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 NAA50Q9GZZ1 169 aaKnown RBP12.86□□□□□ -0.35
SEC13-215ENST00000477547 WDR13Q9H1Z4 485 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 ELL3Q9HB65 397 aaPredicted RBP12.86□□□□□ -0.35
SEC13-215ENST00000477547 DNAJB11Q9UBS4 358 aa12.86□□□□□ -0.35
SEC13-215ENST00000477547 MRPS28Q9Y2Q9 187 aaKnown RBP12.86□□□□□ -0.35
SEC13-215ENST00000477547 DOCK11Q5JSL3 2073 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 NSD1Q96L73 2696 aaPredicted RBP12.85□□□□□ -0.35
SEC13-215ENST00000477547 YLPM1P49750 1951 aaKnown RBP12.85□□□□□ -0.35
SEC13-215ENST00000477547 PPIAL4EA0A075B759 164 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 IGHV3OR15-7A0A075B7D8 119 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 IGKV1-12A0A0C4DH73 117 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 OOEPA6NGQ2 149 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 VWC2LB2RUY7 222 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 PPIAL4DF5H284 164 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 TRAPPC2LH3BP13 241 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 LHBP01229 141 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 IGKV1D-12P01611 117 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 PPIAL4FP0DN26 164 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 RAB3BP20337 219 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 BCL3P20749 454 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 TGFBR1P36897 503 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 MDH2P40926 338 aaKnown RBP12.85□□□□□ -0.35
SEC13-215ENST00000477547 OR10A3P58181 314 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 NCS1P62166 190 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 AWAT2Q6E213 333 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 SFRP4Q6FHJ7 346 aaPredicted RBP12.85□□□□□ -0.35
SEC13-215ENST00000477547 ANKRD13BQ86YJ7 626 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 CLVS1Q8IUQ0 354 aaPredicted RBP12.85□□□□□ -0.35
SEC13-215ENST00000477547 CDH26Q8IXH8 852 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 Q8IYB0 196 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 SAXO1Q8IYX7 474 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 MUC20Q8N307 709 aaPredicted RBP12.85□□□□□ -0.35
SEC13-215ENST00000477547 ZSCAN4Q8NAM6 433 aaPredicted RBP12.85□□□□□ -0.35
SEC13-215ENST00000477547 OR51F2Q8NH61 342 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 EMG1Q92979 244 aaKnown RBP12.85□□□□□ -0.35
SEC13-215ENST00000477547 FOXRED1Q96CU9 486 aaPredicted RBP12.85□□□□□ -0.35
SEC13-215ENST00000477547 S100A13Q99584 98 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 GAL3ST1Q99999 423 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 UQCC2Q9BRT2 126 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 CNTD2Q9H8S5 307 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 PLGRKTQ9HBL7 147 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 MTCH1Q9NZJ7 389 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 PPIAL4AQ9Y536 164 aa12.85□□□□□ -0.35
SEC13-215ENST00000477547 TRAV38-1A0A0B4J264 116 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 NOL3O60936 208 aaKnown RBP12.84□□□□□ -0.35
SEC13-215ENST00000477547 NOS1APO75052 506 aaPredicted RBP12.84□□□□□ -0.35
SEC13-215ENST00000477547 KDM4BO94953 1096 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 CDRT1O95170 752 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 SDC2P34741 201 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 PTGFRP43088 359 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 MXD1Q05195 221 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 ZNF404Q494X3 552 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 LYPD6Q86Y78 171 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 SPICQ8N5J4 248 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 DEFB108BQ8NET1 73 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 PXT1Q8NFP0 134 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 OR4D6Q8NGJ1 314 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 OR6M1Q8NGM8 313 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 SEH1LQ96EE3 360 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 RBFOX1Q9NWB1 397 aaKnown RBP12.84□□□□□ -0.35
SEC13-215ENST00000477547 NLKQ9UBE8 527 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 V9GY05 133 aa12.84□□□□□ -0.35
SEC13-215ENST00000477547 CSPG4Q6UVK1 2322 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 F8VVB4 439 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 F8VWA3 439 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms